PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18326

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 382aa MW: 43280.2 Da PI: 5.021

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18326	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.2	6e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ede+l ++++++G g+W+++++ g+ R++k+c++rw +yl OIW18326 14 KGLWSPDEDEKLFNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	43.3	8.6e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++ ++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ OIW18326 67 RGMFSQQEEDFIISLHEVLGNR-WAQIAAQIP-GRTDNEIKNFWNS 110 788*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MGRHSCCVKQ KLRKGLWSPD EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDFIIS LHEVLGNRWA QIAAQIPGRT DNEIKNFWNS CLKKKLLKQG 120 IDPTTHKPLN EANVKEEKTI IESPQSMQIP FSQVHSATIS TLLPSSSQGS PLLISDSNYY 180 DDGRLAETSR EIFMSKEALD PLSYYDNFQM IVEQNSDYGL PESTNYQTSI ITLFDENQFA 240 TNSNYCFPSM PSLTNSDRVS MTEFSSDNNS GSKISSLFMN DNNNQVKESS SNNSSNMCIY 300 TSEGGCHQMM ENAAGFSWDA ENKLDPLFRF NAIKSEDSKT CNSWEEGQQH LQTHGSIDFS 360 SYPLTSLSED LTGTSFDVFQ HI

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MGRHSCCVKQ KLRKGLWSPD EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGMF SQQEEDFIIS LHEVLGNRWA QIAAQIPGRT DNEIKNFWNS CLKKKLLKQG  120
IDPTTHKPLN EANVKEEKTI IESPQSMQIP FSQVHSATIS TLLPSSSQGS PLLISDSNYY  180
DDGRLAETSR EIFMSKEALD PLSYYDNFQM IVEQNSDYGL PESTNYQTSI ITLFDENQFA  240
TNSNYCFPSM PSLTNSDRVS MTEFSSDNNS GSKISSLFMN DNNNQVKESS SNNSSNMCIY  300
TSEGGCHQMM ENAAGFSWDA ENKLDPLFRF NAIKSEDSKT CNSWEEGQQH LQTHGSIDFS  360
SYPLTSLSED LTGTSFDVFQ HI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	8e-82	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW18326