PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW18240 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MYB | ||||||||
Protein Properties | Length: 205aa MW: 22783.7 Da PI: 9.8389 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.3 | 8.7e-14 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ l + + +G g +W++ +r+ g++R++k+c++rw +yl OIW18240 14 KGPWTREEDDSLTRHIMFHGIGrSWRALPREAGLNRCGKSCRLRWINYL 62 79******************999************************97 PP | |||||||
2 | Myb_DNA-binding | 42.7 | 1.3e-13 | 68 | 112 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T E +v++++qlG++ W++Ia +++ gRt++++k+ w++ OIW18240 68 RGNFTLLENRMIVNLHAQLGNK-WSSIAGRLP-GRTDNEIKNNWNTN 112 899*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MVRSPCCEKE HTRKGPWTRE EDDSLTRHIM FHGIGRSWRA LPREAGLNRC GKSCRLRWIN 60 YLQPGVKRGN FTLLENRMIV NLHAQLGNKW SSIAGRLPGR TDNEIKNNWN TNLLANGIDP 120 RTHKPLSTAI FTTPAPPNNK INSSSDTTRT PTTDSATSMS VVTTNSNSTT TTMMKIGIQT 180 SSGSEVEVES CPELNLELSL ALPSH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16770.2 | 1e-59 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW18240 |