PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW18095

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C3H

Protein Properties

Length: 689aa MW: 77397.7 Da PI: 5.7587

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW18095	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	20.8	6.9e-07	120	142	4	27
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 ++C ff++ G C GdrC F Hgp OIW18095 120 VPCIFFHK-GLCLKGDRCAFLHGP 142 59****.***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MVAQQSQPQI QSPTPSTQDD ALKRNTDCVY FLASPLTCKK GNECEYRHSE YARVNPRDCW 60 YWLNGNCLNP KCSFRHPPLD GLLGTPPATA SAPSLPSIPL LQHTTLSATH APYNSSKPAV 120 PCIFFHKGLC LKGDRCAFLH GPLPNNGNKV VTQDRMNSQG TEIQSFKKSF GGIEQNTQER 180 KISQGIVVKP VGDLEAKPAQ KGETAPQRNF FELKKNVPPT SAGFEDEASR FKITSTPSVI 240 NESTVVRSSH LHQAYVPDDR SFHNGKDNDE FLRETSPGFD VLVADELRNS DYYHGDDEFG 300 NARGQDDLGH SSDYSLAADI GRDRFHVPET NMWEQHTKPP AHLEKRTHHR SDSPNNAEVS 360 DLRIHLSKRR KGNGLKSVVT HDYAVESHGE EHSYRNFSRK DSLQLPLNAS SLSNRFRGRI 420 KLPINGGDGH PERESDRGRI RSRLSSGRLP APHQGWLQDR IIGRVQDGER RNLRDRPVGR 480 ELLGDRTNEF YAPKRLSELK NESSENREQR FLGKRKSLRD QQSDDDFQFE GPKPLSEILK 540 EKKRGVGAGA ASQSGSSSEN KNREITHNSD HTSLTNTQNG ALSETMENVK NREEGSKSHV 600 TDAVGKNVDN IDATHGQSSE EGLIYDEAAE DQEYEGGDQR DDVEYDYDQV DEGDYEYEQI 660 EEGENLEQEY MDEEEDGDDF AKKIGVILT

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MVAQQSQPQI QSPTPSTQDD ALKRNTDCVY FLASPLTCKK GNECEYRHSE YARVNPRDCW  60
YWLNGNCLNP KCSFRHPPLD GLLGTPPATA SAPSLPSIPL LQHTTLSATH APYNSSKPAV  120
PCIFFHKGLC LKGDRCAFLH GPLPNNGNKV VTQDRMNSQG TEIQSFKKSF GGIEQNTQER  180
KISQGIVVKP VGDLEAKPAQ KGETAPQRNF FELKKNVPPT SAGFEDEASR FKITSTPSVI  240
NESTVVRSSH LHQAYVPDDR SFHNGKDNDE FLRETSPGFD VLVADELRNS DYYHGDDEFG  300
NARGQDDLGH SSDYSLAADI GRDRFHVPET NMWEQHTKPP AHLEKRTHHR SDSPNNAEVS  360
DLRIHLSKRR KGNGLKSVVT HDYAVESHGE EHSYRNFSRK DSLQLPLNAS SLSNRFRGRI  420
KLPINGGDGH PERESDRGRI RSRLSSGRLP APHQGWLQDR IIGRVQDGER RNLRDRPVGR  480
ELLGDRTNEF YAPKRLSELK NESSENREQR FLGKRKSLRD QQSDDDFQFE GPKPLSEILK  540
EKKRGVGAGA ASQSGSSSEN KNREITHNSD HTSLTNTQNG ALSETMENVK NREEGSKSHV  600
TDAVGKNVDN IDATHGQSSE EGLIYDEAAE DQEYEGGDQR DDVEYDYDQV DEGDYEYEQI  660
EEGENLEQEY MDEEEDGDDF AKKIGVILT

Link Out ? help Back to Top
Ensembl	OIW18095