PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW18055 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | NF-YA | ||||||||
Protein Properties | Length: 260aa MW: 28529.1 Da PI: 8.9826 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 94.8 | 1e-29 | 93 | 148 | 2 | 58 |
CBFB_NFYA 2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 p YVNaKQy++I++RRq+Rak+ e+kl k kpy+heSRh hAlrRpRg+gGrF OIW18055 93 GPTYVNAKQYHGIMRRRQSRAKALLENKL-RKRSKPYMHESRHLHALRRPRGCGGRF 148 699**************************.999***********************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 260 aa Download sequence |
MLKPPINLLV SSNDDISSSD DYKMLGVEHN PRATLSMQSS LAESHNCFEL GFSQPMIYAT 60 YPCLDQFYGL FSTHGPQIPG RIMLPLNMTS DEGPTYVNAK QYHGIMRRRQ SRAKALLENK 120 LRKRSKPYMH ESRHLHALRR PRGCGGRFLN TRSSYNGNGK NGSEANKTGG GQELLSCGSQ 180 SSEVLQSEVG TLNSSKETNG RSPNISGAEV SSMYSRRGLD SFVVNHLESV SLADIMNNGH 240 GITVPTNWVA AAGNCCNLKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G05690.1 | 4e-55 | NF-YA family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW18055 |