PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW18038
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family ARF
Protein Properties Length: 830aa    MW: 92154.9 Da    PI: 6.5092
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW18038genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.62.7e-24127227198
               EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
               f+k+lt sd++++g +++p++ ae+       +++++++ +l+ +d++g +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++++l+++
  OIW18038 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfSQQPPCQ-ELIARDLHGHEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKGQLLLG 224
               99*****************************86666675.9************************************************..8999999999 PP

               EE- CS
        B3  96 vfr 98 
               ++ 
  OIW18038 225 IRH 227
               986 PP
2Auxin_resp117.61e-38253336183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t+s F+++YnPras+seFv +++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldp rWpnS+Wrs+k
    OIW18038 253 AAHAAATNSRFTIFYNPRASQSEFVTPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVK 336
                 79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 830 aa     Download sequence    
MKLSSAGFSP PPEEGEKRVL DSELWHACAG PLVSLPAVGS RVVYFPQGHS EHVAASTNRE  60
VDGHMPNYPS LPPQLMCQLH NVTMHADPET DEVYAQMTLQ PLSPEEQKEA YFPADLGTPS  120
NQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPCQELIAR DLHGHEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKGQ LLLGIRHANR SQPAMPSSVL  240
SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASQSEFVTPL AKYVKAVYHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDPARWPNS HWRSVKVGWD ESIAGERQPR VSLWEIEPLT  360
TFPMYPSPFP LRLKRPWPLG LPSYHGMKDN DFGMNSSLLW LQGTTDRGLQ SLDFQGIGIN  420
PWMQPRLDPS MVNFQNDMYQ SMAAAALQDM RTLDPSKQHP ASSLQFQQPQ NFPNTAPVLM  480
QTQMLQQSQP QQFVSIPQTQ SSPMQAISSL CHQQSFSGSS GNPAATATAS RLHNMMGSFP  540
QVETSHLLNL PRTSFWMPVQ HSTAWPPSKR VAVDPLLSYG ASLCHAEQIG QPQITMSENA  600
VTLPPFPGRE CAVEGSTDPQ NNILFGVNID PSSLLVHNGM SSLKGVSVNR DSSSTPFQPS  660
NYLNTTGTDS SLNPVMTNSI DESDFLQTPE NGGQGNSPIK TFVKVYKSGT FGRSLDISKF  720
TNYHELRSEL ARMFGLGSEL EDPVRSGWQL VFVDRENDVL LLGDGPWPDF VNSVWCIKIL  780
SPHEVQQMGN NGLELLNSVP IQRLSNGICD DYTGREDQRN LSNGITTLEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein