PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW17733

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 460aa MW: 52933.4 Da PI: 7.045

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW17733	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.5	3.1e-18	190	236	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++ Ed ll+++v+q+G + W+ Ia+t++ gR +kqc++rw+++l OIW17733 190 KGQWSEHEDRLLIQLVEQYGVRKWAHIAQTLP-GRIGKQCRERWHNHL 236 799***************************.***********97 PP
2	Myb_DNA-binding	53.3	6.3e-17	242	284	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + WT eEd++l++ +++ G++ W+ Ia++++ gRt++++k++w+ OIW17733 242 KETWTDEEDKILIQTHAEIGNK-WAEIAKRLP-GRTENSIKNHWN 284 578*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MDLDTDLREN YASQPMHLHE NYIKPSMKDE LPFVAPSSQG FMQEFQHVDQ FHHANASSSN 60 QNFGVQTQNF DPFVDITCGC SQADFEGYEC KPFVENNGNG NHVHVVEDFQ YEGYSLNLPR 120 RNQMDMMASN QIYLPFNPLE TKPLNFVAPD EVSSISATNY YRRFGLNRNN KTSPTTRRSC 180 KVKKKPNIVK GQWSEHEDRL LIQLVEQYGV RKWAHIAQTL PGRIGKQCRE RWHNHLRPDI 240 KKETWTDEED KILIQTHAEI GNKWAEIAKR LPGRTENSIK NHWNATKRRQ YSKRKCRSKY 300 PRGTILQDYI KSLNLDKNPP IDYRRRSSVN AMRLKASATK AAPAAATTIA TQPHGANQVS 360 PNDRLVPNYE FNEVPDFCFN DHMFQEGCSI DSLLDDMPCA PTMNEKDFDG KMQCASNMEG 420 KQVVDVDFET EIPQQMGGNE VKKELDLVEM MSQVNQTSNT

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MDLDTDLREN YASQPMHLHE NYIKPSMKDE LPFVAPSSQG FMQEFQHVDQ FHHANASSSN  60
QNFGVQTQNF DPFVDITCGC SQADFEGYEC KPFVENNGNG NHVHVVEDFQ YEGYSLNLPR  120
RNQMDMMASN QIYLPFNPLE TKPLNFVAPD EVSSISATNY YRRFGLNRNN KTSPTTRRSC  180
KVKKKPNIVK GQWSEHEDRL LIQLVEQYGV RKWAHIAQTL PGRIGKQCRE RWHNHLRPDI  240
KKETWTDEED KILIQTHAEI GNKWAEIAKR LPGRTENSIK NHWNATKRRQ YSKRKCRSKY  300
PRGTILQDYI KSLNLDKNPP IDYRRRSSVN AMRLKASATK AAPAAATTIA TQPHGANQVS  360
PNDRLVPNYE FNEVPDFCFN DHMFQEGCSI DSLLDDMPCA PTMNEKDFDG KMQCASNMEG  420
KQVVDVDFET EIPQQMGGNE VKKELDLVEM MSQVNQTSNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	2e-94	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW17733