PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW17672

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GRAS

Protein Properties

Length: 462aa MW: 51517.9 Da PI: 5.1341

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW17672	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	77.5	2.4e-24	353	456	3	112
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIl 103 ++L++ Ae +++g+ laq +Larl+++ sp g+p+qR+++y++eAL+ l++ ++++ ++ s+ s + ++ a+k fse+sP+l f ++t+Nqa+ OIW17672 353 DQLYKTAELIEAGNPVLAQGILARLNHQLSPVGKPFQRATFYMKEALQLLLNS---NISNFFAFSPIS---FIFKIGAYKSFSEISPFLHFVNFTCNQALI 447 689***********************************************9...888878888887...9************************* PP GRAS 104 eavegeerv 112 ea+e+ +r+ OIW17672 448 EAMERFDRI 456 **99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MKAMPLPFEE FQGKGVFDFC SGATSDSFSL LLRQQQQEQK WSIEKEDYCY VGTEPTSVLE 60 SRRSPNPSLS SSTMSSSLGS NNTVAATTLS ENLPHTSLET STEKCGMRVE DWEGQDQCIM 120 RLIMGDVEDP SAGLSKLFQT DGFGSQNVDF NGGFGVVDQG LNMVSVVDPY VQGNYLGFPF 180 IENIDGHNAK TGSSSVSESI LVSANNPLLV LSPPGVFNSQ QHQPVVGVAD EKPQLINPRL 240 MFNQSQVPFS ENPSLFMPLT YPQMREQEAF SQHKAKRPLS DTVGHDTYQV PRLPRFDFGQ 300 ELLARRQQTQ HPFFPHQHLQ QQLQSLVVPS AKQEKVNSTG DDASNQLQQS IFDQLYKTAE 360 LIEAGNPVLA QGILARLNHQ LSPVGKPFQR ATFYMKEALQ LLLNSNISNF FAFSPISFIF 420 KIGAYKSFSE ISPFLHFVNF TCNQALIEAM ERFDRINALQ RS

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MKAMPLPFEE FQGKGVFDFC SGATSDSFSL LLRQQQQEQK WSIEKEDYCY VGTEPTSVLE  60
SRRSPNPSLS SSTMSSSLGS NNTVAATTLS ENLPHTSLET STEKCGMRVE DWEGQDQCIM  120
RLIMGDVEDP SAGLSKLFQT DGFGSQNVDF NGGFGVVDQG LNMVSVVDPY VQGNYLGFPF  180
IENIDGHNAK TGSSSVSESI LVSANNPLLV LSPPGVFNSQ QHQPVVGVAD EKPQLINPRL  240
MFNQSQVPFS ENPSLFMPLT YPQMREQEAF SQHKAKRPLS DTVGHDTYQV PRLPRFDFGQ  300
ELLARRQQTQ HPFFPHQHLQ QQLQSLVVPS AKQEKVNSTG DDASNQLQQS IFDQLYKTAE  360
LIEAGNPVLA QGILARLNHQ LSPVGKPFQR ATFYMKEALQ LLLNSNISNF FAFSPISFIF  420
KIGAYKSFSE ISPFLHFVNF TCNQALIEAM ERFDRINALQ RS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00150.1	4e-29	GRAS family protein

Link Out ? help Back to Top
Ensembl	OIW17672