PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW17507 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | NF-YC | ||||||||
Protein Properties | Length: 249aa MW: 27856.7 Da PI: 6.511 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 177.2 | 1.6e-55 | 68 | 171 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 ql++fw++q iek+tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdivpr OIW17507 68 QLQQFWATQyqeIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR 168 89*****999899**************************************************************************************** PP NF-YC 99 del 101 ++l OIW17507 169 EDL 171 987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MGVIGSGAQL SYGSNPYQQS QMTGAPGSVV TSAGNMQSIG QPAGAQLGQH QLAYQHIHQQ 60 QQQQLQQQLQ QFWATQYQEI EKVTDFKNHS LPLARIKKIM KADEDVRMIS AEAPVIFARA 120 CEMFILELTL RSWNHTEENK RRTLQKNDIA AAITRTDIFD FLVDIVPRED LKDEVLASIP 180 RGTMPVAGPA DALPYMYMQP QHAPQAGAPG VIMGKPVMDP NMYAQQPHPY MVPQMWPQPQ 240 DQRPSSPDH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 141 | 147 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 2e-83 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW17507 |