PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW17382

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

CO-like

Protein Properties

Length: 397aa MW: 43452.1 Da PI: 5.3068

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW17382	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.7	5e-08	33	76	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+++++++++ C + ++ lC++C +H + H++++ OIW17382 33 LLCERCNSQPASVRCSEEKVSLCQNCDWLGHGSstssstHKRQT 76 57*****************************4488889998876 PP
2	CCT	60.3	6.5e-21	340	382	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 R++a+lRYkeK+k RkF+K++rY+sRK++A+ R+RvKGrFvk OIW17382 340 RNNAVLRYKEKKKIRKFDKRVRYASRKERADVRKRVKGRFVKV 382 99***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MVYCRSDAAC LCLSCDRNVH SANALSKRHS RTLLCERCNS QPASVRCSEE KVSLCQNCDW 60 LGHGSSTSSS THKRQTINCY SGCPSSEELS SIWSFVLDIP STSGSSCEQE LGLMTINENS 120 IKSSSVAPEN QNGTGSDQVN DLPGKDKYRD GASSKAESST KPPVLDHPAG TSNQCLPKFY 180 CPGTKCPSIC EDNMYPDFDM DEVDLNLENY DELFGMTLTH SEDLFENGGF DSLFGTNDIS 240 AEGSDCMGAG AAEGSSVELV NAMQPACSNA ESADSILSTK TEPIICFTSR QVPSNISFCG 300 IAGESNAGDY QDCGASSMLH MEEPHWHPRP ENSLHSSANR NNAVLRYKEK KKIRKFDKRV 360 RYASRKERAD VRKRVKGRFV KVGDAYDYDP LGPTRSY

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MVYCRSDAAC LCLSCDRNVH SANALSKRHS RTLLCERCNS QPASVRCSEE KVSLCQNCDW  60
LGHGSSTSSS THKRQTINCY SGCPSSEELS SIWSFVLDIP STSGSSCEQE LGLMTINENS  120
IKSSSVAPEN QNGTGSDQVN DLPGKDKYRD GASSKAESST KPPVLDHPAG TSNQCLPKFY  180
CPGTKCPSIC EDNMYPDFDM DEVDLNLENY DELFGMTLTH SEDLFENGGF DSLFGTNDIS  240
AEGSDCMGAG AAEGSSVELV NAMQPACSNA ESADSILSTK TEPIICFTSR QVPSNISFCG  300
IAGESNAGDY QDCGASSMLH MEEPHWHPRP ENSLHSSANR NNAVLRYKEK KKIRKFDKRV  360
RYASRKERAD VRKRVKGRFV KVGDAYDYDP LGPTRSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	1e-113	CO-like family protein

Link Out ? help Back to Top
Ensembl	OIW17382