PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW17227
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family ARF
Protein Properties Length: 835aa    MW: 94295.8 Da    PI: 7.0234
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW17227genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.26.7e-23268368198
               EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
               f k+lt sd++++g +++ +++a+e+       +  ++ +++l  +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF   + +++el+v
  OIW17227 268 FSKILTASDTSTHGGFSVLRRHATEClpqldmtQ--QTPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL--RGENGELRV 364
               889***************************9543..445569************************************************..449999*** PP

               EEE- CS
        B3  95 kvfr 98 
               +v+r
  OIW17227 365 GVRR 368
               **98 PP
2Auxin_resp97.81.5e-32394473183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha+ t+++F v+Y+Pr+  s+F++ ++k+++a+k+k+s+GmRfkm+fe eds+err+sGt+vgv d++   W+nS Wrs+k
    OIW17227 394 ASHALMTRTMFVVYYKPRT--SQFIIGLNKYLEAIKNKFSIGMRFKMRFEVEDSPERRFSGTIVGVGDVSA-GWSNSLWRSMK 473
                 6899**************6..9**********************************************777.********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 835 aa     Download sequence    
MSQPESTPKK VVFIMRDQRG NRISCTLWGQ FATQLLKYEE DHKLDPIVVI LTLAKIKEAR  60
GGLQDKFFYN ATVKTIGEII HVCEESVSLT YGTIDKLFSN GWYYEGCPHC NQKTDTISIP  120
GNCVGCGKYL DDVVARYRIE VRVSYGHDSM KFVLWNRFGD DDIYTQLWKL CAGPLVNVPH  180
AEERVYYFPQ GHMEQLQAST NQELNQQMPH FNLPSKILCR VMHIQLLAEQ ETDEVYARIT  240
LLPESDQNEP TSPDPCPPET QKQIFHSFSK ILTASDTSTH GGFSVLRRHA TECLPQLDMT  300
QQTPTQELAA KDLHGFEWKF KHIFRGQPRR HLLTTGWSTF VTSKRLVAGD AFVFLRGENG  360
ELRVGVRRLA RQQSLMPSSV ISSQSMHLGV LATASHALMT RTMFVVYYKP RTSQFIIGLN  420
KYLEAIKNKF SIGMRFKMRF EVEDSPERRF SGTIVGVGDV SAGWSNSLWR SMKVQWDEPA  480
TIPRPERVSA WDLEHFVPST AVNITQPVVK SKRSRPSDVQ SSEITANSPA STFWYHGSSL  540
SHEPTQFGGV GEVRSNENHA MWSLRQKEIN GKPMNTNSST SRVCMEGLWP SSPHLNVSSN  600
YFPELKNNKS VVTTQSSCVI NPPASCRPNN GSMHDEVENG KTTENHTDIW VFGVNLSSNL  660
TNVEFPEKEL ECPAIVPSDP KDFVSIGACE SANGQNLNNS LSTKEQKQII SGASPNERQN  720
KQTSVPSSRT RTKVQMQGVA VGRAVDLTML SGYCDLIDEL EKLFDIKGEL HSKNKWLITY  780
TDDENDTMQV GDDRWPEFCN MVKRIFIIPK EDVKKIKCKD SATSSEIEET LLSTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.20.0ARF family protein