PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW17171

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 264aa MW: 30319.7 Da PI: 6.2599

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW17171	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	131.1	4.6e-41	17	116	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 aCaaCk++rrkCa+dC+lapyfp++++++f n+hklFG+sn++k++k l+++e+++am++++y++++ra+dPv G++++i++lq q+e +ael+l+ ++ OIW17171 17 ACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKFLEPHEKDQAMRTIIYQSDMRANDPVGGCFRHIQDLQAQIEYYHAELELVLQQ 116 7*********************************************************************************************998776 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MNYNNNNPRN GNNTTQACAA CKYQRRKCAP DCILAPYFPH DRQRQFLNAH KLFGVSNITK 60 IIKFLEPHEK DQAMRTIIYQ SDMRANDPVG GCFRHIQDLQ AQIEYYHAEL ELVLQQLAFV 120 RAQAHQQQQS QHVYNPTMSN VNVGINGEDV MSASDPLSLY NAPLTNQYHY ISQVPQHEHY 180 IMLPETNENN CSNNNNNAAL QEHVNAWTMQ NSMSLSSLSL QGQNSNASVG DEYDPKPMLE 240 IPCDERNELG FEVENLVHHR FVYH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	2e-54	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW17171