PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW16826

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 378aa MW: 41475.1 Da PI: 8.4721

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW16826	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	96.8	2.3e-30	238	324	1	87
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqql 87 aCaaC++l++kC+kdCvlapyfp ++ k++ +vhk+FG + ++k+l++l e+er++a++s +eA ++++dPv+G +g ++k+++++ OIW16826 238 ACAACRHLKKKCNKDCVLAPYFPTKKIKQYFVVHKVFGYNIMTKMLSNLVEQERNEAVESFQWEAMMWQQDPVHGPLGAYKKGRWRI 324 7********************************************************************************999976 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MALLFEKCND LQLSGLTHIN GPGFHIHVLH SKNVIISGVN ITAPEYSRNT DGIDTTNVEG 60 IIIRDSIIGT GDDCIAIKGG TKFLNISNIQ CGPGHGISVG SVGGHGQEDY VSDIHVRNCS 120 ITGATGGVRI KTWAGSKGSV QRVRFEHITV KQTNYPIYID QHYAHSKEQP QAIKVSDVTF 180 SDIHGTSSPN VPPTPPPLYS MPPPPSASHS HASPYSTPSM VRYTNKEEGE GNNASRHACA 240 ACRHLKKKCN KDCVLAPYFP TKKIKQYFVV HKVFGYNIMT KMLSNLVEQE RNEAVESFQW 300 EAMMWQQDPV HGPLGAYKKG RWRIFHGCAA SYRKRNFIAS LQVDNSGSTL DGVPFVDIGD 360 LVKEGSIAPI FMVTPNFV

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MALLFEKCND LQLSGLTHIN GPGFHIHVLH SKNVIISGVN ITAPEYSRNT DGIDTTNVEG  60
IIIRDSIIGT GDDCIAIKGG TKFLNISNIQ CGPGHGISVG SVGGHGQEDY VSDIHVRNCS  120
ITGATGGVRI KTWAGSKGSV QRVRFEHITV KQTNYPIYID QHYAHSKEQP QAIKVSDVTF  180
SDIHGTSSPN VPPTPPPLYS MPPPPSASHS HASPYSTPSM VRYTNKEEGE GNNASRHACA  240
ACRHLKKKCN KDCVLAPYFP TKKIKQYFVV HKVFGYNIMT KMLSNLVEQE RNEAVESFQW  300
EAMMWQQDPV HGPLGAYKKG RWRIFHGCAA SYRKRNFIAS LQVDNSGSTL DGVPFVDIGD  360
LVKEGSIAPI FMVTPNFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06280.1	2e-24	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW16826