PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW16722

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 556aa MW: 59815.2 Da PI: 5.6229

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW16722	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.3	1.6e-09	372	420	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq OIW16722 372 NSHSLAERVRREKISERMKLLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 420 58***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MSEKEKLELD RNQDPMSYSS AMNLDWRFGG ADLPNSSVGL IAMGNSMNVS RGDLIGSSSC 60 SSALVVDSFG PNFWDHTPNS QNIGFGDINN VRNNGSSSHR IGFGRSGHDH GALEMGWNPA 120 NPLLKGDGFI PMGRGVFPQS LSQFPTDSGF IERAARFSCF GGGNFGEMVN SYGAPQSISL 180 YAGPGTMHGT RNALAGHGLK PAPGEQSQET DLNVVEAAKD VSPCVEHLAT KGSPLKNDKR 240 SESCGITHDE RKQALVRPAN ESDRAESNDD DGGGQDDSTM LEGTSGEPSN KGPNSKKRKR 300 SGQDADNDKG NGATELAGEG ANDNSESPQK GDQQPTSATK ASGKNAKEGS EASGPPKEEF 360 IHVRARRGQA TNSHSLAERV RREKISERMK LLQDLVPGCN KVTGKAVMLD EIINYVQSLQ 420 RQVEFLSMKL ATVNPRLDFN VEGLLAKDIL HQRPGPSSAL RFPLEMSMAY PQLHPSQPGL 480 IQSTLPSMAN TSDIFCRNIH PQMVPSSGGF KEPNQLTDAW EDELHNVVQM SYAPTIPLNN 540 QDVDGNVAAN QMKVEL

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MSEKEKLELD RNQDPMSYSS AMNLDWRFGG ADLPNSSVGL IAMGNSMNVS RGDLIGSSSC  60
SSALVVDSFG PNFWDHTPNS QNIGFGDINN VRNNGSSSHR IGFGRSGHDH GALEMGWNPA  120
NPLLKGDGFI PMGRGVFPQS LSQFPTDSGF IERAARFSCF GGGNFGEMVN SYGAPQSISL  180
YAGPGTMHGT RNALAGHGLK PAPGEQSQET DLNVVEAAKD VSPCVEHLAT KGSPLKNDKR  240
SESCGITHDE RKQALVRPAN ESDRAESNDD DGGGQDDSTM LEGTSGEPSN KGPNSKKRKR  300
SGQDADNDKG NGATELAGEG ANDNSESPQK GDQQPTSATK ASGKNAKEGS EASGPPKEEF  360
IHVRARRGQA TNSHSLAERV RREKISERMK LLQDLVPGCN KVTGKAVMLD EIINYVQSLQ  420
RQVEFLSMKL ATVNPRLDFN VEGLLAKDIL HQRPGPSSAL RFPLEMSMAY PQLHPSQPGL  480
IQSTLPSMAN TSDIFCRNIH PQMVPSSGGF KEPNQLTDAW EDELHNVVQM SYAPTIPLNN  540
QDVDGNVAAN QMKVEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	296	301	KKRKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.1	1e-110	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW16722