PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW16633

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C3H

Protein Properties

Length: 2023aa MW: 224114 Da PI: 8.3452

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW16633	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	18.8	2.9e-06	1896	1916	6	26
-SGGGGTS--TTTTT-SS-SS CS zf-CCCH 6 CrffartGtCkyGdrCkFaHg 26 C++f tGtC+ G +Ck +H+ OIW16633 1896 CPTFETTGTCSDGTKCKLHHP 1916 *****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 2023 aa Download sequence
MDQHHSHHFH RTRYAPLSSQ HHHHHHHNPN HLPPPPSLPP PPPPQPPHAH PSSYPPQFHP 60 NHPVHISNSH NHHNHVPRRS FSDFDQSSWN PNPRDVPENR PPRNYSPVDF DRQLHHRPVE 120 RVLPPPPPLP QYQPIDNRRY DRDDGSSRLR MERMDVYESK PREREREEFV WSRGGEENYH 180 HRDFGLKYDS PSQSVRDIDV DLKPEGYVRV YDVGEVEVTR GDRRNVIGES KKWINDRQGP 240 RELRDSSKNE IGAAGNKNGF QIVSGKRDYY GNELGRYNSR GNIREGAHEF THTSPHKQIQ 300 KKSALLRLQT LKPNHRNREN EQLRYTGYAA ENNSSFVRGK EQHQAENNSN YFRGKEQHGY 360 GHGVKAEERK RSPVELDISF ESNSLVAKAI VAPSSSAVVC DTNKTPVSDT DMCSAEKRRK 420 VLVSDSDRSG LPTAKLSAGS VRLGSSPSKA NDTSSSAKDL SSQKNVSDTC SPPCAIVADN 480 SHGKNEATLS NVTTNVCAEK SSTMVVKKKK IVRRVVKKVI KNPNSTVSPS PSADTHHGAV 540 QRDSLTFKLP NSSAPDKIET SLKEKSTTVD KVSIADCLHS LPNEGNVLPE DMKEGLSPLS 600 LGPHSRSQEC KTNEDSDSGK SARFEGDGNI SNSPSHVSSS IDDKQSDFDC LVANNSARDL 660 LSIPNIDEVT KSLNGITSEI NDMVYDNKQL CQNEVSLSLV NYPNIGFPQN SYLVDVGDEM 720 NCRLVCSSDN IVNTDLINTC DSANDRVYCL NSNYLTGSEK THTGSVENFT VSESGNDGIV 780 GKAYCENKAP TITQNVNSEE NPDTAVPSSG MIAILSSGNT GIEEGPNCIQ HSSLLKQGSD 840 NESANSEDSI TVHCFNTGKL VPPSDATISP ENCDTEETLS NLKFSVGFDE GKTNKINERE 900 VKTHLNILCS KMEGVSTDPV NPDSYATDVD RASNFLKNPS PSQDLDKSVQ SLDFNSKPSA 960 DEVTTLHGKL EVSEAECYIE NNVNDDANKV SRVSKRKKLK KVTAGHPRFT DAIVVTTSCA 1020 DVPTSFSNNQ PHEKESALSS MGTLSIAQSI PSSEDISKLP NNILVGGSFD SIDADRGIVS 1080 SEHLELQHSD IASYSLCENV AILNVQFSML QGRPKENSIP ILPISSTQTD TLIIGHIKGE 1140 KTDLQAVEEN YQYRGLVQIS PSALMESNDL NMESNDLNTK DDLLPQQNLM SCPTNGDGVN 1200 TINSDELIED VPDALSNMCS KGMASEDYSK VQSQGLNSYD SELNGCKNQA GGIIPKTSQG 1260 LSFTLSKTKS KAKTSASSTH ISKPRTWHRA LNTSASLPGI KPLVATVPPK GPILVRKGNF 1320 QKTSYIRKGN SLVRKPSPVS ASPQISSAKQ STSFDLDELP KSTRSERQVD VIGPILKAGV 1380 TSAPQQRQRT PPAPINTMSE ENMSPPLVGP PSSVCYDAPN SCENATKHYE TPNNQTGPSN 1440 NEESQVEAND ENVSSLNAKR VVYIKPKTNK LVATSTPQDV SVSTDDKAQT TFSDGYYKRS 1500 KNQLVRTTFE SRINQTVAMP NSTVNSDRQV AHKVLCNRRF SKRRSNKVAG SSCKPLRASL 1560 VWTLRGGNSS KNDSDSRYYQ KVLPHLFPWK RATYLRGFVN NYSSSSNRSS LSAISKKLLL 1620 LRKRDTVYTR STHGFSLWKS KVLGVGGSSL KWSKSLEKHS KQANEEATLA VAAVERKKRE 1680 QEDATFIGSQ AKRERIFRIG SVRYRMDPSR RTLQRISDGE PLSSASVPSG LTAKRAYIPK 1740 RLVIGNDEYV RIGNGNQLIR DPKKRTRKLA NEKVRWSLHT ARQRLARKQK YCQFFTRFGK 1800 CNKDGGKCPY IHDPLKIAVC TKFLKGLCST PNCKLTHKVI PDRMPDCSYF LQGLCTNRDC 1860 PYRHVNVNPK ASICEGFLKG YCANGNECRK KHSYVCPTFE TTGTCSDGTK CKLHHPLRQS 1920 KGKKRKRSED QNSRGRYFGS SPIHVYEPGM VVAPKQHQQN DDDLEELPDY IGLDGYFDVD 1980 EEVTENIDQS FEQAACDSDS LDLQLDNLDD LIKPVLIMKS SQS

Sequence ? help Back to Top

Protein Sequence Length: 2023 aa Download sequence

MDQHHSHHFH RTRYAPLSSQ HHHHHHHNPN HLPPPPSLPP PPPPQPPHAH PSSYPPQFHP  60
NHPVHISNSH NHHNHVPRRS FSDFDQSSWN PNPRDVPENR PPRNYSPVDF DRQLHHRPVE  120
RVLPPPPPLP QYQPIDNRRY DRDDGSSRLR MERMDVYESK PREREREEFV WSRGGEENYH  180
HRDFGLKYDS PSQSVRDIDV DLKPEGYVRV YDVGEVEVTR GDRRNVIGES KKWINDRQGP  240
RELRDSSKNE IGAAGNKNGF QIVSGKRDYY GNELGRYNSR GNIREGAHEF THTSPHKQIQ  300
KKSALLRLQT LKPNHRNREN EQLRYTGYAA ENNSSFVRGK EQHQAENNSN YFRGKEQHGY  360
GHGVKAEERK RSPVELDISF ESNSLVAKAI VAPSSSAVVC DTNKTPVSDT DMCSAEKRRK  420
VLVSDSDRSG LPTAKLSAGS VRLGSSPSKA NDTSSSAKDL SSQKNVSDTC SPPCAIVADN  480
SHGKNEATLS NVTTNVCAEK SSTMVVKKKK IVRRVVKKVI KNPNSTVSPS PSADTHHGAV  540
QRDSLTFKLP NSSAPDKIET SLKEKSTTVD KVSIADCLHS LPNEGNVLPE DMKEGLSPLS  600
LGPHSRSQEC KTNEDSDSGK SARFEGDGNI SNSPSHVSSS IDDKQSDFDC LVANNSARDL  660
LSIPNIDEVT KSLNGITSEI NDMVYDNKQL CQNEVSLSLV NYPNIGFPQN SYLVDVGDEM  720
NCRLVCSSDN IVNTDLINTC DSANDRVYCL NSNYLTGSEK THTGSVENFT VSESGNDGIV  780
GKAYCENKAP TITQNVNSEE NPDTAVPSSG MIAILSSGNT GIEEGPNCIQ HSSLLKQGSD  840
NESANSEDSI TVHCFNTGKL VPPSDATISP ENCDTEETLS NLKFSVGFDE GKTNKINERE  900
VKTHLNILCS KMEGVSTDPV NPDSYATDVD RASNFLKNPS PSQDLDKSVQ SLDFNSKPSA  960
DEVTTLHGKL EVSEAECYIE NNVNDDANKV SRVSKRKKLK KVTAGHPRFT DAIVVTTSCA  1020
DVPTSFSNNQ PHEKESALSS MGTLSIAQSI PSSEDISKLP NNILVGGSFD SIDADRGIVS  1080
SEHLELQHSD IASYSLCENV AILNVQFSML QGRPKENSIP ILPISSTQTD TLIIGHIKGE  1140
KTDLQAVEEN YQYRGLVQIS PSALMESNDL NMESNDLNTK DDLLPQQNLM SCPTNGDGVN  1200
TINSDELIED VPDALSNMCS KGMASEDYSK VQSQGLNSYD SELNGCKNQA GGIIPKTSQG  1260
LSFTLSKTKS KAKTSASSTH ISKPRTWHRA LNTSASLPGI KPLVATVPPK GPILVRKGNF  1320
QKTSYIRKGN SLVRKPSPVS ASPQISSAKQ STSFDLDELP KSTRSERQVD VIGPILKAGV  1380
TSAPQQRQRT PPAPINTMSE ENMSPPLVGP PSSVCYDAPN SCENATKHYE TPNNQTGPSN  1440
NEESQVEAND ENVSSLNAKR VVYIKPKTNK LVATSTPQDV SVSTDDKAQT TFSDGYYKRS  1500
KNQLVRTTFE SRINQTVAMP NSTVNSDRQV AHKVLCNRRF SKRRSNKVAG SSCKPLRASL  1560
VWTLRGGNSS KNDSDSRYYQ KVLPHLFPWK RATYLRGFVN NYSSSSNRSS LSAISKKLLL  1620
LRKRDTVYTR STHGFSLWKS KVLGVGGSSL KWSKSLEKHS KQANEEATLA VAAVERKKRE  1680
QEDATFIGSQ AKRERIFRIG SVRYRMDPSR RTLQRISDGE PLSSASVPSG LTAKRAYIPK  1740
RLVIGNDEYV RIGNGNQLIR DPKKRTRKLA NEKVRWSLHT ARQRLARKQK YCQFFTRFGK  1800
CNKDGGKCPY IHDPLKIAVC TKFLKGLCST PNCKLTHKVI PDRMPDCSYF LQGLCTNRDC  1860
PYRHVNVNPK ASICEGFLKG YCANGNECRK KHSYVCPTFE TTGTCSDGTK CKLHHPLRQS  1920
KGKKRKRSED QNSRGRYFGS SPIHVYEPGM VVAPKQHQQN DDDLEELPDY IGLDGYFDVD  1980
EEVTENIDQS FEQAACDSDS LDLQLDNLDD LIKPVLIMKS SQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1917	1926	LRQSKGKKRK
2	1923	1928	KKRKRS

Link Out ? help Back to Top
Ensembl	OIW16633