PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW16524
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family CO-like
Protein Properties Length: 412aa    MW: 45413.5 Da    PI: 5.0843
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW16524genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box18.73.5e-06544639
  zf-B_box  6 CpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
              C+ +++++   +C+++  +lC +C  + H+       H++
  OIW16524  5 CDFCGDQRPVVYCRSDAACLCLSCDRNVHSAnalsrrHSR 44
              *****************************65677777766 PP

2zf-B_box20.41.1e-064677436
  zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36
                C++++++++   C++ +  lC++C   +H g
  OIW16524 46 LLCERCNSQPAFVRCTEENISLCQNCDWLGH-G 77
              57************************99999.5 PP

3CCT55.71.7e-19355398144
       CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
               R +a++RY+eKrk RkF+K++rY sRKa+A+ R+R KGrFvk+ 
  OIW16524 355 RSNAVMRYREKRKARKFDKRVRYVSRKARADVRKREKGRFVKAG 398
               899**************************************975 PP

Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MGYLCDFCGD QRPVVYCRSD AACLCLSCDR NVHSANALSR RHSRTLLCER CNSQPAFVRC  60
TEENISLCQN CDWLGHGTTT SSSTRKRQTI DCYSGCPSSA ELSSIWSFFS NIPSIGEACE  120
QELGLMSINK NSNNSTWVPS ESRNVSGSAQ VSDLSSKDKS LFGISSMPES SSKPRLLDQL  180
PESIDECIPK LNFSGKKSPG IFEDGDLYDN FNMDEVDLDL ENYEELFGMT LSHSEDLFEN  240
GGFDSLFMTK EMSASAGDSN CQGAVAAEGS FVGLVNVVQP AYSNAASTDS MFSSKTEPIL  300
CITGRQSQSN ISFSGISKDS GAGDYQDCGV SSMHLMGEPP WCPPCPESSL QSATRSNAVM  360
RYREKRKARK FDKRVRYVSR KARADVRKRE KGRFVKAGDV YDYDPLSETR SY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07650.21e-138CO-like family protein