PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW16524 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | CO-like | ||||||||
Protein Properties | Length: 412aa MW: 45413.5 Da PI: 5.0843 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 18.7 | 3.5e-06 | 5 | 44 | 6 | 39 |
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +++++ +C+++ +lC +C + H+ H++ OIW16524 5 CDFCGDQRPVVYCRSDAACLCLSCDRNVHSAnalsrrHSR 44 *****************************65677777766 PP | |||||||
2 | zf-B_box | 20.4 | 1.1e-06 | 46 | 77 | 4 | 36 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36 C++++++++ C++ + lC++C +H g OIW16524 46 LLCERCNSQPAFVRCTEENISLCQNCDWLGH-G 77 57************************99999.5 PP | |||||||
3 | CCT | 55.7 | 1.7e-19 | 355 | 398 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a++RY+eKrk RkF+K++rY sRKa+A+ R+R KGrFvk+ OIW16524 355 RSNAVMRYREKRKARKFDKRVRYVSRKARADVRKREKGRFVKAG 398 899**************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 412 aa Download sequence |
MGYLCDFCGD QRPVVYCRSD AACLCLSCDR NVHSANALSR RHSRTLLCER CNSQPAFVRC 60 TEENISLCQN CDWLGHGTTT SSSTRKRQTI DCYSGCPSSA ELSSIWSFFS NIPSIGEACE 120 QELGLMSINK NSNNSTWVPS ESRNVSGSAQ VSDLSSKDKS LFGISSMPES SSKPRLLDQL 180 PESIDECIPK LNFSGKKSPG IFEDGDLYDN FNMDEVDLDL ENYEELFGMT LSHSEDLFEN 240 GGFDSLFMTK EMSASAGDSN CQGAVAAEGS FVGLVNVVQP AYSNAASTDS MFSSKTEPIL 300 CITGRQSQSN ISFSGISKDS GAGDYQDCGV SSMHLMGEPP WCPPCPESSL QSATRSNAVM 360 RYREKRKARK FDKRVRYVSR KARADVRKRE KGRFVKAGDV YDYDPLSETR SY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07650.2 | 1e-138 | CO-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW16524 |