PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW16431
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family GRAS
Protein Properties Length: 548aa    MW: 61380.4 Da    PI: 6.312
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW16431genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS459.22.5e-1401785481374
      GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
               l+++L+ cA+av+++dl +aq+l+ +l++l++ +g+p+qRl ay++e+L ar+++s+s++yk+l+++e +   s+e l+++++++ev+P++kf+++ aN a
  OIW16431 178 LKNVLIGCAKAVADSDLLMAQWLMDELRQLVAVSGEPIQRLGAYMLEGLVARMYSSGSSIYKSLRCKEPE---SAELLSYMHILHEVCPYFKFGYMSANGA 275
               5789*****************************************************************9...9*************************** PP

      GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
               I ea+++e+rvHiiDf+isqG QW++L+qa+a+Rp+gpp++RiTg+++++s   +   l+ +g+rL+k+Ae+++vpfef++ +a +  d++l++L v+pgE
  OIW16431 276 IAEAMKHEDRVHIIDFQISQGCQWITLIQAFAARPGGPPHIRITGIDDSTSAyaRGGGLHIVGKRLSKLAEHFKVPFEFHA-AAMSGCDVQLHKLGVRPGE 375
               ************************************************998899999************************.8999*************** PP

      GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvace 301
               alaVn++++lh+++desvs++++rd +L+lvkslsPkvv++veqe+++n++ F+ rfle+l+yy+a+fds++++lpre++eri+vE+++l+r++vn++ace
  OIW16431 376 ALAVNFAFMLHHMPDESVSIQNHRDMLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLDYYTAMFDSIDVTLPREHKERINVEQHCLARDLVNIIACE 476
               ***************************************************************************************************** PP

      GRAS 302 gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
               g er+erhe l+kWr+r+ +aGF+p+pls+ +++++k ll +++++ yr+ee++g+l+lgW++r Lv+ SaW+
  OIW16431 477 GVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNCTIKKLLDNYSDR-YRLEERDGALYLGWMNRDLVTSSAWK 548
               ********************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 548 aa     Download sequence    
MHASEHHTSS SMYHEPLQQM EAYCLPQYQT LNHQLYDSGG GHGITNFSNP ISSELYCTLE  60
SSSGTGSFTV YNSTSAVSFT ANGSPISWQD SHSYPPYQHH NNHSPDNTYI SSMSGSCITN  120
DLSSIRHKLR ELESVMLGPD SDNIDDSYDT AFNDGANFVS SEMEILRQTM VGICSKNLKN  180
VLIGCAKAVA DSDLLMAQWL MDELRQLVAV SGEPIQRLGA YMLEGLVARM YSSGSSIYKS  240
LRCKEPESAE LLSYMHILHE VCPYFKFGYM SANGAIAEAM KHEDRVHIID FQISQGCQWI  300
TLIQAFAARP GGPPHIRITG IDDSTSAYAR GGGLHIVGKR LSKLAEHFKV PFEFHAAAMS  360
GCDVQLHKLG VRPGEALAVN FAFMLHHMPD ESVSIQNHRD MLLRLVKSLS PKVVTLVEQE  420
SNTNTAAFFP RFLETLDYYT AMFDSIDVTL PREHKERINV EQHCLARDLV NIIACEGVER  480
VERHEVLGKW RSRFAMAGFT PYPLSSLVNC TIKKLLDNYS DRYRLEERDG ALYLGWMNRD  540
LVTSSAWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein