PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW16393
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family C3H
Protein Properties Length: 304aa    MW: 34652.6 Da    PI: 9.153
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW16393genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.39.7e-07184207327
               S---SGGGGTS--TTTTT-SS-SSS CS
   zf-CCCH   3 telCrffartGtCkyGdrCkFaHgp 27 
                + C++f + G+C++G++C++ Hg+
  OIW16393 184 VKTCHYFNK-GFCRHGSSCRYYHGQ 207
               678******.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MSIWDYTRIL LDKIQKFEPE YAGKIIGYFL SQDNCEQEMA KLASYHDYYI REVAFKAKMY  60
LQSFAARPVM LPISPPLNPQ QGFSHFSVIS PRTPTSLPGF QVPSPSWDQL SVSRTNLELM  120
AINSLDSMTR LTRQTELLSL ENHIDSLDTE TGGIAHDYFG LEASAAGFGV KTSRRLSSLS  180
GFRVKTCHYF NKGFCRHGSS CRYYHGQVVS ESFPQMYGND AMTEDQMFSP RSLAQLEAEI  240
VDLMKSRRGR PLSIALLPTA YQDKYNRMLK FDGYLTESQR HGKSGYSLTK LLVRLKNSIQ  300
LIQR