PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW16390
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family GRAS
Protein Properties Length: 419aa    MW: 47270.2 Da    PI: 4.9015
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW16390genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4262.9e-130504192374
      GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaI 102
               +e L +cA+av+ +++e +++l+++l++++s +g+p+qRl ay++eAL arla+s+s++yk+l+++e +   s e l+++++++e++P+lkf+++ aN aI
  OIW16390  50 KEMLCACAKAVEGNEKETTEWLMSELRKMVSVSGNPIQRLGAYVLEALVARLASSGSTIYKSLKCKEPT---SNELLSYMHALYEICPYLKFGYMSANGAI 147
               789*****************************************************************9...999999*********************** PP

      GRAS 103 leavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEa 201
                ea++ e++vHiiDf+i+qG+QW++L++aL+ Rp+gpp++RiT +++++s   +   l  +gerL+ +A + +vpfef++ +  + ++l+le+L++++gEa
  OIW16390 148 AEAMKDETEVHIIDFQINQGIQWVSLIRALSGRPGGPPKIRITCLDDSTSAyaRGGGLDIIGERLSGLALSYEVPFEFHA-IDASPSELQLEDLQLRSGEA 247
               ***********************************************998899999************************.68899*************** PP

      GRAS 202 laVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvaceg 302
               +aVn++++lh+++d sv+ +++rd++L+l k lsPkvv++veqe+++n+ +F+ rf+e+l+yy a+f+s++  lpre++eri+vE+++l+re+vn++aceg
  OIW16390 248 IAVNFAMMLHHVPDGSVDGKDYRDRLLRLAKCLSPKVVTLVEQESNTNNVPFFPRFVETLNYYLAIFESIDIALPREHKERINVEQHCLAREVVNLIACEG 348
               ***************************************************************************************************** PP

      GRAS 303 aerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
               aer+erhe ++kWr+r+++aGF+p+pls+++++++k l ++++ + y++ee++g+l+lgW+++ +v+ +aWr
  OIW16390 349 AERVERHELMNKWRSRFTMAGFTPYPLSSYINSSIKNLQERYG-RHYTLEESDGALYLGWMNQVIVASCAWR 419
               ******************************************9.66*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MIELESAMLG ADADILDIYD IMIPQESDPN LLEAEKWKKM MEIVYRGDLK EMLCACAKAV  60
EGNEKETTEW LMSELRKMVS VSGNPIQRLG AYVLEALVAR LASSGSTIYK SLKCKEPTSN  120
ELLSYMHALY EICPYLKFGY MSANGAIAEA MKDETEVHII DFQINQGIQW VSLIRALSGR  180
PGGPPKIRIT CLDDSTSAYA RGGGLDIIGE RLSGLALSYE VPFEFHAIDA SPSELQLEDL  240
QLRSGEAIAV NFAMMLHHVP DGSVDGKDYR DRLLRLAKCL SPKVVTLVEQ ESNTNNVPFF  300
PRFVETLNYY LAIFESIDIA LPREHKERIN VEQHCLAREV VNLIACEGAE RVERHELMNK  360
WRSRFTMAGF TPYPLSSYIN SSIKNLQERY GRHYTLEESD GALYLGWMNQ VIVASCAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein