PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW16388 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 952aa MW: 103180 Da PI: 6.6207 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.8 | 8.2e-32 | 223 | 280 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k OIW16388 223 DDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIVYKGTHDHPK 280 8****************************************.***************85 PP | |||||||
2 | WRKY | 100.8 | 8.2e-32 | 612 | 669 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k OIW16388 612 DDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIVYKGTHDHPK 669 8****************************************.***************85 PP | |||||||
3 | WRKY | 105.3 | 3.1e-33 | 772 | 830 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ OIW16388 772 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 830 59********************************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 952 aa Download sequence |
MDASTTNESN SVSDPNDPNK KFGSGQNNSA RYKLMSPAKL PISRSPCITI PPGLSPSSFL 60 ESPVLLSNMK VEPSPTTGSF SKLHQTVHGS MPSAMAATFP VTTTCLNSNT VEERKSNIFE 120 FKPNMVPVDF NNHVSEQYTQ AKGPGKAQSF ASSPLVEGDI AVPSNELSLS SPVQMVSSGA 180 STPVEVDSEE LNHKGNTATA LQASQVEEVK GSGPSVAPER ASDDGYNWRK YGQKLVKGSE 240 FPRSYYKCTH PNCEVKKLFE RSHDGQITEI VYKGTHDHPK PQPSRRYSSS TIVSMQEERS 300 GKPSLAGRDA DPNSTPDLSA VATNDCQEGA ALVSNRTNEE IDDDDPFSKR RKMELGIADV 360 TPIVKPIREP RVVVQTLSEV DILDDGNTTM DASTTNESNS VSDPNDPNKK FGSGQNNSAR 420 YKLMSPAKLP ISRSPCITIP PGLSPSSFLE SPVLLSNMKV EPSPTTGSFS KLHQTVHGSM 480 PSAMAATFPV TTTCLNSNTV EERKSNIFEF KPNMVPVDFN NHVSEQYTQA KGPGKAQSFA 540 SSPLVEGDIA VPSNELSLSS PVQMVSSGAS TPVEVDSEEL NHKGNTATAL QASQVEEVKG 600 SGPSVAPERA SDDGYNWRKY GQKLVKGSEF PRSYYKCTHP NCEVKKLFER SHDGQITEIV 660 YKGTHDHPKP QPSRRYSSST IVSMQEERSG KPSLAGRDAD PNSTPDLSAV ATNDCQEGAA 720 LVSNRTNEEI DDDDPFSKRR KMELGIADVT PIVKPIREPR VVVQTLSEVD ILDDGYRWRK 780 YGQKVVRGNP NPRSYYKCTN AGCPVRKHVE RASHDPKAVI TTYEGKHNHD VPAARSSSHD 840 MAGPAPAGTR IKLEESDTIS LDLGMGISSA AENRSNGQRK MLLSEYGQNQ TQQTSNSNFK 900 FVHTSAGPVY FGVLDNGANP YGSRGNRNDD ASLNHASSYP CSQNIGRVLT GP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G26640.2 | 1e-175 | WRKY family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW16388 |