PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW16290

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SRS

Protein Properties

Length: 343aa MW: 36002.7 Da PI: 8.0582

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW16290	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	212.4	1.1e-65	125	284	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkelets 103 gt++CqdCGnqakkdC +RCRtCCksrgfdC thvkstWvpaa+rrerq +++ + ++a+++ +k+++ ++++++ s+t++s+++++++++ts OIW16290 125 GGTTTCQDCGNQAKKDCCNQRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMQSVTGGGGCSTASTSGAKKPKL--ISSHTTNSHTSTSNTTPPRSFDTS 223 5789********************************************9998888777777777777777775..59999999***********9 PP DUF702 104 s..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 s lP +++++avf+cv+v++v+dg++e+aYq++v igGhvfkG+LydqG+e+ OIW16290 224 SshqdggikepLPGQIRAPAVFKCVKVTAVEDGDDEYAYQAVVRIGGHVFKGFLYDQGVEN 284 99******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MGMVGLRDLF VVTPASTFHH HHEQPHYSDH HPPHHSINSS SNPATALGVG IVPLLAATPC 60 LDNETMMSNR NRGSSGGIQG IQFWQDQQPH HYLKNHNVNV CHENYVQSGG SGGGGGITVS 120 GTNSGGTTTC QDCGNQAKKD CCNQRCRTCC KSRGFDCPTH VKSTWVPAAR RRERQLMQSV 180 TGGGGCSTAS TSGAKKPKLI SSHTTNSHTS TSNTTPPRSF DTSSSHQDGG IKEPLPGQIR 240 APAVFKCVKV TAVEDGDDEY AYQAVVRIGG HVFKGFLYDQ GVENRDVYPN LSELHLGGGS 300 GGNGNGGGGS GRNGVSSSSP MMDPSVVYGG GLLGGSTYGN PIN

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MGMVGLRDLF VVTPASTFHH HHEQPHYSDH HPPHHSINSS SNPATALGVG IVPLLAATPC  60
LDNETMMSNR NRGSSGGIQG IQFWQDQQPH HYLKNHNVNV CHENYVQSGG SGGGGGITVS  120
GTNSGGTTTC QDCGNQAKKD CCNQRCRTCC KSRGFDCPTH VKSTWVPAAR RRERQLMQSV  180
TGGGGCSTAS TSGAKKPKLI SSHTTNSHTS TSNTTPPRSF DTSSSHQDGG IKEPLPGQIR  240
APAVFKCVKV TAVEDGDDEY AYQAVVRIGG HVFKGFLYDQ GVENRDVYPN LSELHLGGGS  300
GGNGNGGGGS GRNGVSSSSP MMDPSVVYGG GLLGGSTYGN PIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	3e-73	SRS family protein

Link Out ? help Back to Top
Ensembl	OIW16290