PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW16200 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | bHLH | ||||||||
Protein Properties | Length: 221aa MW: 24478.1 Da PI: 9.1969 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.7 | 4.9e-14 | 33 | 79 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h+++E+rRRdriN +++Lr+l+Pk+ K++Ka+ L +ve++k+L OIW16200 33 NSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSVVEHVKDL 79 68*************************8.....7****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MPHASDFIQP SEYPSWPLPI EGAAEHRAAS ASNSHSQAEK RRRDRINAQL ATLRKLIPKS 60 DKMDKAALLG SVVEHVKDLK RKAMDMSKAI TVPTEIDEVT IDYYPAAEDE SYTKVNIFKD 120 NITIKASVCC DDRPELFSEL IQVLKGLRLT TVKADIASSG GRIKSILVLC SKDSEEGSVC 180 LTTLKQSLKS AVNKIASLST ASNYPTRSKR QRFFLPSHCL Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 1e-48 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW16200 |