PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW16037 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MYB | ||||||||
Protein Properties | Length: 1025aa MW: 115353 Da PI: 5.7761 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.3 | 7.1e-08 | 467 | 511 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++WT eEd+ l+ v+ +G ++W+ Ia + ++Rt+ qc r+q OIW16037 467 DPWTGEEDKSLLLTVQIMGIRNWSGIAVSLATNRTPFQCLARYQR 511 69*****************************************96 PP | |||||||
2 | Myb_DNA-binding | 42.3 | 1.8e-13 | 521 | 563 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eEd +l av+++G ++W ++a+ + +Rt+ qc +rw k OIW16037 521 EWTEEEDAQLCSAVALYGEHDWQSVASVLE-RRTGTQCSNRWKK 563 7*****************************.***********98 PP | |||||||
3 | Myb_DNA-binding | 38.9 | 2e-12 | 570 | 613 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g +T eEde+l av ++G + W+ +a+ ++ gR qc++r+++ OIW16037 570 KGCFTREEDERLTVAVMLFGRK-WSQVAKFVP-GRIQSQCRDRYLN 613 689*****************99.*********.***********98 PP | |||||||
4 | Myb_DNA-binding | 46.5 | 8.2e-15 | 623 | 665 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WT+eEd +l+da++++G W+++a+ + Rt+ qc+ rw+ + OIW16037 623 GWTKEEDSRLKDAIAKHGFC-WSKVAEDLL-PRTDSQCRKRWRVL 665 5*******************.********9.9**********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1025 aa Download sequence |
MTPRADEYEE DNLSSTDDDE DDVALKEDMA ALSRACMLVS GSATAGDGVT ARSKNDHHEL 60 VLHDDDDDDD DSGGILLEDP LLESGDAIVP LKNVDSDSDD DDDEDDLECL RRVESLYQPL 120 ASLPPLSPLR ITMTNASGNN VDDEDEDDDE DDLETLRAIR SRFSSYNEGD METLVDGDQT 180 SCLGHEGETA NGSVSDRWDV GELCAVSPIQ DNATDSFPSN VEVEHCGLID SCEQDACRLS 240 KLPQKRSSFP SSAQAFIDAI NKNRSMQRFL RSKLIEIEAK IEENKQLRNK VKVMKDFQAA 300 CIRKTGSALS LKKDPRVQLI SAKKPSAPKN SKSRNKKISA MCYGPAENSH VSNYKMVLER 360 FPLSLDRKKW TNSERENLKK GIKQQFQETV LQNSADRISS EFSDGYGNDM DSIIASVNDL 420 EITPEDIKKF IPQVNWDKLA STYDVGHTGA ECESRWLNYE DPLINHDPWT GEEDKSLLLT 480 VQIMGIRNWS GIAVSLATNR TPFQCLARYQ RSLNASMLNS EWTEEEDAQL CSAVALYGEH 540 DWQSVASVLE RRTGTQCSNR WKKSLYPDKK GCFTREEDER LTVAVMLFGR KWSQVAKFVP 600 GRIQSQCRDR YLNSLDPSLK WGGWTKEEDS RLKDAIAKHG FCWSKVAEDL LPRTDSQCRK 660 RWRVLCPDQV PLLRDARKMQ KLTVNSNFVD RESERPALTL KDFLPLPMLP LLSDEADDVK 720 VPRKRKWKWS NVSNKMRSKR QARKAQVCLK DIAFSDGVKI CDEDAVNMAC LRKSNFFPTN 780 DQGDLSRQDT SEKFLYFNPI WKWQGCTGQN KENWSCTLPC ESPASMTSRG KTHRQRRGRN 840 HSAKDSLEHK SKHIRGAEPS EHKQKTKMRK PGSLSACVES LDQDRDITLA SLLNHKSKKN 900 IASHPKVKKQ NVMIDDDGGG DDVTLACLLA NKSKKPNEAA KGRRACCSPS KLKKGSVLLP 960 EVLCTNKPVI TADDNELSLP ELVEEQPVSS GAVAEPTNIN VEGDDLLVNF LQNKRRKQRK 1020 RARIG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 720 | 726 | KVPRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18100.1 | 1e-176 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW16037 |