PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15773

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

ARF

Protein Properties

Length: 709aa MW: 78234.4 Da PI: 7.5874

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15773	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.7	4.5e-23	110	211	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f k+lt+sd+++ g +++p+ +ae++ +++ + ++++d +g++W++++iyr++++r++lt+GW++Fv++++L +gD+vvF + +++ + OIW15773 110 FAKTLTQSDANNGGGFSVPRYCAETMfpkldysAEPPVQ--IVIVKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSVVFL--RAENGDISI 206 89*******************999875444444..79999******************************************..347888899 PP EEE-S CS B3 95 kvfrk 99 +++r+ OIW15773 207 GIRRA 211 99986 PP
2	Auxin_resp	111.9	6.1e-37	281	363	2	83
Auxin_resp 2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 + a+t+++Fe vY+Prast+eF++k++ v+ a++++++ GmRfkmafetedss++++ +Gt+++v+ +dp+rWpnS+Wr+L+ OIW15773 281 MALAATNKPFEFVYYPRASTPEFCIKASAVKVAMRIQWCSGMRFKMAFETEDSSRISWfMGTIASVQVVDPIRWPNSPWRLLQ 363 67899****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 709 aa Download sequence
MKESQKSLDP ELWHACAGGM VQMPPLNSKV FYFPQGHAEH AHTNLDFVDS MRIPPLILCS 60 VAAVKFFADP ETDEVFARVR LVPLRNAEVD YDTDGDCANA SENSEKSVSF AKTLTQSDAN 120 NGGGFSVPRY CAETMFPKLD YSAEPPVQIV IVKDVHGEVW KFRHIYRGTP RRHLLTTGWS 180 SFVNQKKLVA GDSVVFLRAE NGDISIGIRR AKRGIGGGSE APSGWSSGAG NCGIGPYGAF 240 SVFLREDTKI LGNGVGNSSP GGGVNLSGSA KVSSESVRDA MALAATNKPF EFVYYPRAST 300 PEFCIKASAV KVAMRIQWCS GMRFKMAFET EDSSRISWFM GTIASVQVVD PIRWPNSPWR 360 LLQVTWDEPD LLHNVKHISP WLVELVSNVP VIHLSPFPPP RKRLRFPPHL DFPYDVQFPI 420 PMFSGNAVGT SSPLRCLSDN APAGIQEARH AQIGKSLSDF HFHNNKLRLG VLPTNIQQLN 480 FNAAGISNGN ITNHDKSKES LSWLLTDGNS RKSLEKSDNV KRHQFLLFGQ PILTEQQISR 540 RACDLLSQNC SAGKDSPDEN KDKEKSFSVD SQSTLSEQFS PGKSCTTESW QMGLDTTGHC 600 KVFMESEDVG RTLDLTSLGS YEELYRRLSN MFGIERSEML SHVLYRDVTG AVKQIGEEPF 660 SAFRNTAKRL TILTDSGSKD TKRTWIAGTQ NAEHGLDAPN KTGPLSIFA

Sequence ? help Back to Top

Protein Sequence Length: 709 aa Download sequence

MKESQKSLDP ELWHACAGGM VQMPPLNSKV FYFPQGHAEH AHTNLDFVDS MRIPPLILCS  60
VAAVKFFADP ETDEVFARVR LVPLRNAEVD YDTDGDCANA SENSEKSVSF AKTLTQSDAN  120
NGGGFSVPRY CAETMFPKLD YSAEPPVQIV IVKDVHGEVW KFRHIYRGTP RRHLLTTGWS  180
SFVNQKKLVA GDSVVFLRAE NGDISIGIRR AKRGIGGGSE APSGWSSGAG NCGIGPYGAF  240
SVFLREDTKI LGNGVGNSSP GGGVNLSGSA KVSSESVRDA MALAATNKPF EFVYYPRAST  300
PEFCIKASAV KVAMRIQWCS GMRFKMAFET EDSSRISWFM GTIASVQVVD PIRWPNSPWR  360
LLQVTWDEPD LLHNVKHISP WLVELVSNVP VIHLSPFPPP RKRLRFPPHL DFPYDVQFPI  420
PMFSGNAVGT SSPLRCLSDN APAGIQEARH AQIGKSLSDF HFHNNKLRLG VLPTNIQQLN  480
FNAAGISNGN ITNHDKSKES LSWLLTDGNS RKSLEKSDNV KRHQFLLFGQ PILTEQQISR  540
RACDLLSQNC SAGKDSPDEN KDKEKSFSVD SQSTLSEQFS PGKSCTTESW QMGLDTTGHC  600
KVFMESEDVG RTLDLTSLGS YEELYRRLSN MFGIERSEML SHVLYRDVTG AVKQIGEEPF  660
SAFRNTAKRL TILTDSGSKD TKRTWIAGTQ NAEHGLDAPN KTGPLSIFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28350.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	OIW15773