PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15711

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 461aa MW: 51003.6 Da PI: 8.531

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15711	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.6	1.2e-17	29	76	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +l+++v+ +G g+W+++++ g+ R++k+c++rw ++l OIW15711 29 KGPWTPDEDAILIEYVNTYGEGNWNSVPKNSGLSRCGKSCRLRWANHL 76 79******************************************9986 PP
2	Myb_DNA-binding	48.4	2.2e-15	82	125	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+ +vd++++lG++ W++ a+ ++ gRt++++k++w++ OIW15711 82 KGAFSPEEERVIVDLHAKLGNK-WARMASQLP-GRTDNEIKNFWNT 125 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MMRIISNNNN NNNNNNEEVA NDYEGSLKKG PWTPDEDAIL IEYVNTYGEG NWNSVPKNSG 60 LSRCGKSCRL RWANHLRPNL KKGAFSPEEE RVIVDLHAKL GNKWARMASQ LPGRTDNEIK 120 NFWNTRIKRR ERAGLPIYPP KVIRDATLYH LREEQYFEKP YNSSLTSSSF PPLLSSYPKK 180 LNASNHYHAL VNPKKLNNSN HYHALVNPKK NQPIPLYGSS SNLFNYHGFV VSNNSAQPVS 240 HGSQYFNNGF NISSIMPPLA PSSVSSSQTP PDSVTPASSN VSGVDGFMGA SSKVNNEQYE 300 VAPFSLEGNR SLLGALVVEG QSILRNNNTR SEDSTVVTAA EKSSNKRKSI VIMENAEERG 360 TTVDSALKKK NSGKSSNEIP MTSSGKKQSG KDPTLEEIDV SWDDDLCSLL NNFPTEMPTP 420 EWYSGGDKAE SSGHQKTQTN TPPPGPTIEP ELGWNNMPSI C

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MMRIISNNNN NNNNNNEEVA NDYEGSLKKG PWTPDEDAIL IEYVNTYGEG NWNSVPKNSG  60
LSRCGKSCRL RWANHLRPNL KKGAFSPEEE RVIVDLHAKL GNKWARMASQ LPGRTDNEIK  120
NFWNTRIKRR ERAGLPIYPP KVIRDATLYH LREEQYFEKP YNSSLTSSSF PPLLSSYPKK  180
LNASNHYHAL VNPKKLNNSN HYHALVNPKK NQPIPLYGSS SNLFNYHGFV VSNNSAQPVS  240
HGSQYFNNGF NISSIMPPLA PSSVSSSQTP PDSVTPASSN VSGVDGFMGA SSKVNNEQYE  300
VAPFSLEGNR SLLGALVVEG QSILRNNNTR SEDSTVVTAA EKSSNKRKSI VIMENAEERG  360
TTVDSALKKK NSGKSSNEIP MTSSGKKQSG KDPTLEEIDV SWDDDLCSLL NNFPTEMPTP  420
EWYSGGDKAE SSGHQKTQTN TPPPGPTIEP ELGWNNMPSI C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	3e-66	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW15711