PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW15666 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MYB | ||||||||
Protein Properties | Length: 227aa MW: 26660.1 Da PI: 6.7616 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.1 | 8.7e-18 | 9 | 56 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Edell +v+q+G g W++++++ g++R++k+c++rw++yl OIW15666 9 KGAWSKVEDELLRSCVEQYGEGKWHLVPKRAGLNRCRKSCRLRWLNYL 56 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52 | 1.6e-16 | 62 | 106 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +T+eE +l ++++k+lG++ W++Ia +++ gRt +++k++w++y OIW15666 62 RGEFTEEEVDLMIRLHKLLGNR-WSLIAGRLP-GRTSNDVKNYWNTY 106 899*******************.*********.************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MDGSLGVRKG AWSKVEDELL RSCVEQYGEG KWHLVPKRAG LNRCRKSCRL RWLNYLKPNI 60 NRGEFTEEEV DLMIRLHKLL GNRWSLIAGR LPGRTSNDVK NYWNTYIRKK LPSQREDINE 120 RPKEIVREPS SVIKPQPWNI STKMPFLRDK EDHSEDKECI TNQGCLATAS ECNKENDTSW 180 FDVQDWTLLK DFNWDANLNS LTTNVEQFVV EDQSWSDVPF NINLWDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 2e-58 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW15666 |