PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15558

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 652aa MW: 72594.8 Da PI: 7.0994

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15558	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	38	4.1e-12	290	346	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+a++ a++k++g OIW15558 290 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEEKAARAYDLAALKYWG 346 78*****************77776664346655.77****************98 PP
2	AP2	44.2	4.6e-14	389	440	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f + eeAa+a++ a+ k++g OIW15558 389 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSSQEEAAEAYDVAAIKFRG 440 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence
MRTMNDINSN NGDGSNHNWL GFSLMKMENN HHDDDDQVQD HHHYYHNSQQ DSTVSNTSVP 60 TNFYWENSDF HSLPLSMMPL KSDGSLCILE AHTRSQTQDF LGGATMGNDQ YGGSEREAMA 120 LSLNSIYYNQ NPHESQTSRD LLSDPFRQQH PYYSGFACNG IYQPPMMEQE TKQTHVTVCS 180 SSQIPQVGDE GIACFKSWEN QLNNNNTSIG DDVGASGSGS GGVSSVQHCG NLQALSLSMS 240 PGSQSSCVTI PSVTTTNSVA IETKKRGSAK LGQKQPVHRK SIDTFGQRTS QYRGVTRHRW 300 TGRYEAHLWD NSCKKEGQTR KGRQGGYDME EKAARAYDLA ALKYWGSSTH INFPVENYRM 360 QLEEMKNMSR QEFVAHLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT 420 FSSQEEAAEA YDVAAIKFRG VNAVTNFDIS RYHVEKIIAS NTLLAGEQAR RNNKESEPRT 480 KAIEYNVVPS QINNKEVEAE NNNNNNNDTN VSDWKMALYH ESPQQQQQSN SNSCGQKAMN 540 CGNYRNHAFS MSLQDLIGID SLGSSHQTTM LDHDSTTKLG THFSDQSSLV ANLSSTRECS 600 SDKTCPTMFF PKPPIGSTKI VSPIATTGVS SWFPSPAISM SQLPVFAAWN DA

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence

MRTMNDINSN NGDGSNHNWL GFSLMKMENN HHDDDDQVQD HHHYYHNSQQ DSTVSNTSVP  60
TNFYWENSDF HSLPLSMMPL KSDGSLCILE AHTRSQTQDF LGGATMGNDQ YGGSEREAMA  120
LSLNSIYYNQ NPHESQTSRD LLSDPFRQQH PYYSGFACNG IYQPPMMEQE TKQTHVTVCS  180
SSQIPQVGDE GIACFKSWEN QLNNNNTSIG DDVGASGSGS GGVSSVQHCG NLQALSLSMS  240
PGSQSSCVTI PSVTTTNSVA IETKKRGSAK LGQKQPVHRK SIDTFGQRTS QYRGVTRHRW  300
TGRYEAHLWD NSCKKEGQTR KGRQGGYDME EKAARAYDLA ALKYWGSSTH INFPVENYRM  360
QLEEMKNMSR QEFVAHLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT  420
FSSQEEAAEA YDVAAIKFRG VNAVTNFDIS RYHVEKIIAS NTLLAGEQAR RNNKESEPRT  480
KAIEYNVVPS QINNKEVEAE NNNNNNNDTN VSDWKMALYH ESPQQQQQSN SNSCGQKAMN  540
CGNYRNHAFS MSLQDLIGID SLGSSHQTTM LDHDSTTKLG THFSDQSSLV ANLSSTRECS  600
SDKTCPTMFF PKPPIGSTKI VSPIATTGVS SWFPSPAISM SQLPVFAAWN DA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-126	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW15558