PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW15073 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 179aa MW: 19832.6 Da PI: 6.7704 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 121.4 | 4.8e-38 | 11 | 110 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+l+r+C+++Cv+apyf +++ +kfa vhk+FGasnv+k+l ++p+e+red+++sl++eAear+rdPvyG++g i lq ++ l+++la +k++ OIW15073 11 SCAACKLLKRRCTPNCVFAPYFHSDECNKFAKVHKVFGASNVSKILIEVPQEHREDTVNSLAFEAEARLRDPVYGCIGDIVLLQMKMVDLQHDLAIAKDR 110 6*********************************************************************************************999875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 179 aa Download sequence |
MKGYESRSSS SCAACKLLKR RCTPNCVFAP YFHSDECNKF AKVHKVFGAS NVSKILIEVP 60 QEHREDTVNS LAFEAEARLR DPVYGCIGDI VLLQMKMVDL QHDLAIAKDR LARCAAATAT 120 ATTTTSDDVL HATHASLPHL RGFSTSNDFN DSLCHGSSSS ELLRRHEIMD DCIEIPYIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G11090.1 | 5e-59 | LBD family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW15073 |