PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW14738

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C3H

Protein Properties

Length: 1477aa MW: 161229 Da PI: 4.6098

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW14738	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	19.8	1.4e-06	1455	1476	3	25
S---SGGGGTS--TTTTT-SS-S CS zf-CCCH 3 telCrffartGtCkyGdrCkFaH 25 ++ C+ f ++G Ck Gd+C F+H OIW14738 1455 RVACK-FNESGRCKKGDSCDFMH 1476 67899.***************** PP

Sequence ? help Back to Top
Protein Sequence Length: 1477 aa Download sequence
MDNKEDDEAP TLLSHDLSNT QDEGENVIAD ELPQEGEKAV DDIGLGIDYV ASGKTEAAVV 60 VSEEREVSDS VTEVEPIEGD EIFEEDKVTS AIDEAENVIQ NQRVEEGTEV GDVESGKAEE 120 EEDDADVGYD DSADEADVEI GHSQGTDDVI RDEKEVPNEE QEEEKELSVH EGDNDGVGDD 180 TTQDTDTAAL MEEGEGEEEA GDGDGDGDGD GDGDGDGDGD GMAQDIEEEE EQGGGGDGME 240 EDDEVREEQS ESVSGGKRKR GPAKNSKTTR RVASKKKTEE DVCFICFDGG DLVLCNRRGC 300 PKAYHPSCVN RDEAFFRTKG KWNCGWHLCS NCEKNAHYMC YTCTFSLCKG CIKDAIIFCV 360 RGNKGFCETC MTTVMLIEQN EQGNTGQVDF DDKNSWEYLF KDYYIDLKEK LSLTFDELTE 420 AKNPWKGSDM AASKDESPDE LYDANNDKGS DSDNSYENVG SSRSKRRKGK KRAKSRSKEG 480 NSYAATVLAA DVTSADDRSE WSSKELLEFV MHMRNGDTSI LSQFDVQALL LEYIKRNKLR 540 DPCRKSQIIC DARLQNLFGK PRVGHFEMLK LLESHFLLKE DYQGEDLQGS VVDTDVTHLD 600 GDGNSDSYLK AGKDKRRKTR KKGDERGLHS NVDDYAAIDN HNINLIYLRR NLVEDLLEDT 660 ENFPDKAVGS FVRIRISGSG QKQDLYRLVQ VAGTCKAAEP YKVGKRMTDI LLEILNLNKT 720 EIVSIDIISN QEFTEDECKR LRQSIKCGLI NRLTVGNIQD KAFALQAVRV KDWLETEIVR 780 LSHLRDRASE KGRRKEYPFL LKTPEERQRR LEEVPEIHVD PKMDPSYESE EDEDEMNDKG 840 QESYMRPRGS AAFGRKAREI VSPRSGSSDS WSGTRNYSNA NRELNRNLSN KGFSMKGDDV 900 FNSSEALNDA QLRDRESQLS NSRERQRLSS SSEIGVKNAQ PLVASESFSN AVLEPSAAPS 960 SAGIASPTVK INESEKMWHY QDPSGKVQGP FSMVQLRKWN NTGYFPADLR IWRTTEKQDE 1020 SMPLKDALDG KFSKESPVVD KTLPKAQMVH DLHNSSSYLG KSHLAAQQGI IEGQVGARPT 1080 FDQNSGSWNS SHSSLGSLGQ TTGGSRPSPL VVEVPKTTSD GWGSNVGVRN ESTNLPSPTP 1140 QTPSVGTMVQ GFENNWSPTP ILGNPNLSGP GGLQNAENGL SSRTVMMSAS TTQVHPQATT 1200 LAPGLQNQVV SSHNSHAGAQ GWGSGLVSKV EPQALGATPS QRVEPNNHAT MPVQNSASFI 1260 TGNPTGNFPA QSYPGQSNIS APAPPNNMPW NMGVVQNQNA TAWGGMPGNQ NTSRGGGAVP 1320 ANVNMNWMPA PGNANPGWAA APSQGPPPPV NAAGWVAPGQ GRPHVNSNMG WGQGHAPGNA 1380 NPGWPASVGN QGTQGTWGGG EHNHNGDRLG NQRDRGTHGG RDSGYGGKPW SRQTPFNSGG 1440 SRGGGSSRPP FGGQRVACKF NESGRCKKGD SCDFMHT

Sequence ? help Back to Top

Protein Sequence Length: 1477 aa Download sequence

MDNKEDDEAP TLLSHDLSNT QDEGENVIAD ELPQEGEKAV DDIGLGIDYV ASGKTEAAVV  60
VSEEREVSDS VTEVEPIEGD EIFEEDKVTS AIDEAENVIQ NQRVEEGTEV GDVESGKAEE  120
EEDDADVGYD DSADEADVEI GHSQGTDDVI RDEKEVPNEE QEEEKELSVH EGDNDGVGDD  180
TTQDTDTAAL MEEGEGEEEA GDGDGDGDGD GDGDGDGDGD GMAQDIEEEE EQGGGGDGME  240
EDDEVREEQS ESVSGGKRKR GPAKNSKTTR RVASKKKTEE DVCFICFDGG DLVLCNRRGC  300
PKAYHPSCVN RDEAFFRTKG KWNCGWHLCS NCEKNAHYMC YTCTFSLCKG CIKDAIIFCV  360
RGNKGFCETC MTTVMLIEQN EQGNTGQVDF DDKNSWEYLF KDYYIDLKEK LSLTFDELTE  420
AKNPWKGSDM AASKDESPDE LYDANNDKGS DSDNSYENVG SSRSKRRKGK KRAKSRSKEG  480
NSYAATVLAA DVTSADDRSE WSSKELLEFV MHMRNGDTSI LSQFDVQALL LEYIKRNKLR  540
DPCRKSQIIC DARLQNLFGK PRVGHFEMLK LLESHFLLKE DYQGEDLQGS VVDTDVTHLD  600
GDGNSDSYLK AGKDKRRKTR KKGDERGLHS NVDDYAAIDN HNINLIYLRR NLVEDLLEDT  660
ENFPDKAVGS FVRIRISGSG QKQDLYRLVQ VAGTCKAAEP YKVGKRMTDI LLEILNLNKT  720
EIVSIDIISN QEFTEDECKR LRQSIKCGLI NRLTVGNIQD KAFALQAVRV KDWLETEIVR  780
LSHLRDRASE KGRRKEYPFL LKTPEERQRR LEEVPEIHVD PKMDPSYESE EDEDEMNDKG  840
QESYMRPRGS AAFGRKAREI VSPRSGSSDS WSGTRNYSNA NRELNRNLSN KGFSMKGDDV  900
FNSSEALNDA QLRDRESQLS NSRERQRLSS SSEIGVKNAQ PLVASESFSN AVLEPSAAPS  960
SAGIASPTVK INESEKMWHY QDPSGKVQGP FSMVQLRKWN NTGYFPADLR IWRTTEKQDE  1020
SMPLKDALDG KFSKESPVVD KTLPKAQMVH DLHNSSSYLG KSHLAAQQGI IEGQVGARPT  1080
FDQNSGSWNS SHSSLGSLGQ TTGGSRPSPL VVEVPKTTSD GWGSNVGVRN ESTNLPSPTP  1140
QTPSVGTMVQ GFENNWSPTP ILGNPNLSGP GGLQNAENGL SSRTVMMSAS TTQVHPQATT  1200
LAPGLQNQVV SSHNSHAGAQ GWGSGLVSKV EPQALGATPS QRVEPNNHAT MPVQNSASFI  1260
TGNPTGNFPA QSYPGQSNIS APAPPNNMPW NMGVVQNQNA TAWGGMPGNQ NTSRGGGAVP  1320
ANVNMNWMPA PGNANPGWAA APSQGPPPPV NAAGWVAPGQ GRPHVNSNMG WGQGHAPGNA  1380
NPGWPASVGN QGTQGTWGGG EHNHNGDRLG NQRDRGTHGG RDSGYGGKPW SRQTPFNSGG  1440
SRGGGSSRPP FGGQRVACKF NESGRCKKGD SCDFMHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16485.1	0.0	C3H family protein

Link Out ? help Back to Top
Ensembl	OIW14738