PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW14539 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 333aa MW: 37441.9 Da PI: 6.9358 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55 | 1.8e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l++ ++++G g+W++ ++ g++R++k+c++rw +yl OIW14539 14 KGPWTLEEDQKLIHHIQEHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.7 | 2.3e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++Ia +++ gRt++++k++w+++l OIW14539 67 RGKFSKEEEQTILHLHSILGNK-WSAIATHLP-GRTDNEIKNFWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 333 aa Download sequence |
MGRSPCCDEI GLKKGPWTLE EDQKLIHHIQ EHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SKEEEQTILH LHSILGNKWS AIATHLPGRT DNEIKNFWNT HLRKKLIQMG 120 FDPMTHQPRT DLVSTLPYLL ALANMADIMD HNQSLDEHAL RLQAEAVQLA KLQYLHFLLQ 180 SSNSSTTNNL SMKEHNTVME LTQVDNNNNN NNPNSFSHGI IAGFGSQPLH HQNNMLYDFL 240 DPQVSFNSQS FLNNEQGQGT NYAIISQGGH TTFDHASTNW IIPSPITPNA MGTSITSNPG 300 DASSSTSSYG GGISSYNWPE LFFEDTIKMH DSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G34670.1 | 1e-102 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW14539 |