PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIW14524 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 163aa MW: 19163.6 Da PI: 6.1314 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90 | 1.2e-28 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtfskRrng++KKA+ELS+LCd+++a+i+fs++g+l +s OIW14524 9 KRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLNHFS 58 79********************************************9997 PP | |||||||
2 | K-box | 19.1 | 5.6e-08 | 99 | 156 | 13 | 70 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKn 70 + e+lqqe+++L +++++ + ++R + + + s+++L++ e++L + l+++ ++K OIW14524 99 EIEELQQEVNRLHQQLQMTEAQIRIYEPDPSKMTSMEDLESTEKNLVDTLTRVMQRKV 156 5689***************************************************995 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 163 aa Download sequence |
MGRVKLEIKR IENTTNRQVT FSKRRNGLIK KAYELSILCD IDIALIMFSP SGRLNHFSGR 60 RRIEDVFTRF INLPDQERDN AVNFPEPHYD RSPGDINCEI EELQQEVNRL HQQLQMTEAQ 120 IRIYEPDPSK MTSMEDLEST EKNLVDTLTR VMQRKVDNNH DTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G22130.1 | 3e-70 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIW14524 |