PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW13941 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | ERF | ||||||||
Protein Properties | Length: 283aa MW: 31519.7 Da PI: 4.7074 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.6 | 2.7e-17 | 27 | 76 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr ++ +gr++AeIrdp++ + r++lg+f+taeeAa a+++a +++g OIW13941 27 KFLGVRKRP-WGRYAAEIRDPTT---KERHWLGTFDTAEEAAIAYDRASISMKG 76 678******.**********965...5*********************999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MNSFFLQLNT SSPNERRGRR KQAEPGKFLG VRKRPWGRYA AEIRDPTTKE RHWLGTFDTA 60 EEAAIAYDRA SISMKGSQAR TNFIYSDNNN NNNNNTIFHN FITPMEEVQS LLPTPQFITN 120 TQSQNAICDE TVYGSKPILD DSFFFSNDSN NNSGYLECIV PDSCLRPVSM QSNVNALEAH 180 SHFDNTAFSQ GALNMQTTMQ ASNFGGFSYQ SEPSQGFLDD KQSWNCNSSE LSAIFNKPLR 240 TEDGYCMAAL CPISESSNYG TVSSCSPSLP PPFGDVDLGY SPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18560.1 | 1e-45 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW13941 |