PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW13853
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family GRAS
Protein Properties Length: 552aa    MW: 61868.7 Da    PI: 5.8021
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW13853genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS412.83.1e-1261795501374
      GRAS   1 lvelLlecAeavssgdlelaqalLar.lselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
               l+e+L+ cA+avs++d++ +   + + l +++s +g+p+qRl ay++e+L+arl +s+s +ykal++++ +   s++ +++++++++++P+ kf+++ +N 
  OIW13853 179 LKEVLVLCARAVSDEDFQTVIGWMDNvLVKMVSVAGEPVQRLGAYMLEGLRARLESSGSLIYKALKCEQPT---SKDLMTYMHVLYQICPYWKFAYISTNV 276
               5789**************8877776516788***************************************9...9999999******************** PP

      GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                I ea+++e r+HiiDf+  qG+QW+ L+qa+a+Rp+gpp +R+Tgv++++s+  +   l  +g+rL+++A+++gvpfef+  +a   +++el++L ++pg
  OIW13853 277 VIGEAMQNEPRIHIIDFQTAQGTQWMLLMQAFACRPGGPPFIRVTGVDDSQSFhaRGGGLDIVGKRLSDYAKSCGVPFEFHS-AAMCGSEVELKNLVIRPG 376
               *************************************************9999889999***********************.899*************** PP

      GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvac 300
               EalaVn+ + lh+++desvs+e++rd++L+lvkslsPkvv++veqe+++n+++F++rf+e+l+yy+a+f+s+++  pr++++ri+ E+++++r+ivn++ac
  OIW13853 377 EALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLDYYTAMFESIDVARPRDDKQRISAEQHCVARDIVNMIAC 477
               ***************************************************************************************************** PP

      GRAS 301 egaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
               egaer+erhe l+kWr+r+++aGF p+pls++++  ++ +l++++++ yrv + +g+l+lgWk+rp+   SaWr
  OIW13853 478 EGAERVERHEPLGKWRSRFSMAGFAPYPLSSSVTGAVRNMLNEFNEN-YRVAHTDGALYLGWKNRPMSNSSAWR 550
               *********************************************55.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    
MQTSKKHATS PDVYLYHQPV QGIDPYTSYQ ILQSNSCHDI HDSSSSQGTT ASFETIKDQY  60
FTLDSSPAII GLIGCDSPSY ASVSSDTSHF SPQGSQSYNS DQQQSSNNNY GSPISVYSSA  120
DDDYELKHKL RELEISLLGP ESDIVESCQC CFKGDHQGGS PIDKYNWTHI VEMIPKLDLK  180
EVLVLCARAV SDEDFQTVIG WMDNVLVKMV SVAGEPVQRL GAYMLEGLRA RLESSGSLIY  240
KALKCEQPTS KDLMTYMHVL YQICPYWKFA YISTNVVIGE AMQNEPRIHI IDFQTAQGTQ  300
WMLLMQAFAC RPGGPPFIRV TGVDDSQSFH ARGGGLDIVG KRLSDYAKSC GVPFEFHSAA  360
MCGSEVELKN LVIRPGEALA VNFPYVLHHM PDESVSTENH RDRLLRLVKS LSPKVVTLVE  420
QESNTNTSPF FQRFVETLDY YTAMFESIDV ARPRDDKQRI SAEQHCVARD IVNMIACEGA  480
ERVERHEPLG KWRSRFSMAG FAPYPLSSSV TGAVRNMLNE FNENYRVAHT DGALYLGWKN  540
RPMSNSSAWR CY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein