PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13776

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 705aa MW: 77636.2 Da PI: 6.5776

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13776	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.1	3.3e-11	250	306	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g OIW13776 250 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 306 57*****************4444.2455535555.779999************98 PP
2	AP2	38	4.2e-12	370	414	8	55
AP2 8 wdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++ grW A+I + +k +lg+fgt eeAa+a++ a+ k++g OIW13776 370 RHHQHGRWQARIGRVAG---NKDLYLGTFGTQEEAAEAYDVAAIKFRG 414 7899*****988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MGSMNWLGFS LAPNEEDNHS HSQTVPPSLD FNPDGTDISP SFAIFEDLNT NNTHAPTTPQ 60 DWNTKGLGNN SSEYNYYNNS SQNMLLGTSC NQQQHPKLEN FLGQHSFGDN NLNHTTYGGS 120 INNTTSSSSG DLMFQNCSLK PPLGSGDGGD GGGSPRNYTS IGLSMIKTWL RNQPPQSDSA 180 NMKSSTVSQS SSSVALPLLT SNVDNGDSSS SDNNKHNPKT SSAVVNDQSG DAVENAVPRK 240 SVDTFGQRTS IYRGVTRHRW TGRYEAHLWD NSCRREGQTR KGRQGGYDKE EKAARAYDLA 300 ALKYWGTTTT TNFPISNYEK ELEEMKHMTR QEYVASLRRK SSGFSRGASI YRGVTRVAVR 360 FEQIKNGACR HHQHGRWQAR IGRVAGNKDL YLGTFGTQEE AAEAYDVAAI KFRGLNAVTN 420 FDMTRYDVKS ILESTTLPIG AAAKRNLKDN NIDLTVTTLD HNINAPHIRS LSSSEENNMS 480 SQLSYGATTL YHGWPSLAFQ QPQQLYSQVP NNYTTYGHNS QKFWCKQEQD PDDHASHQNF 540 QDMHYQLQLG SNNNNNNNTH NFFQSDSGLN SIMSIGGSAS MDNNSPSSSS IIYGGGDGNN 600 GYGNGRGYMI PMATTTFNIA DDGNQNHISN GYGNDDNNEV KVVGYENGYG SSTNDPYNNA 660 RNLYYQQTSA EACNNWVPTA IPTLASRSNN VALCHGTQPF TLLHE

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MGSMNWLGFS LAPNEEDNHS HSQTVPPSLD FNPDGTDISP SFAIFEDLNT NNTHAPTTPQ  60
DWNTKGLGNN SSEYNYYNNS SQNMLLGTSC NQQQHPKLEN FLGQHSFGDN NLNHTTYGGS  120
INNTTSSSSG DLMFQNCSLK PPLGSGDGGD GGGSPRNYTS IGLSMIKTWL RNQPPQSDSA  180
NMKSSTVSQS SSSVALPLLT SNVDNGDSSS SDNNKHNPKT SSAVVNDQSG DAVENAVPRK  240
SVDTFGQRTS IYRGVTRHRW TGRYEAHLWD NSCRREGQTR KGRQGGYDKE EKAARAYDLA  300
ALKYWGTTTT TNFPISNYEK ELEEMKHMTR QEYVASLRRK SSGFSRGASI YRGVTRVAVR  360
FEQIKNGACR HHQHGRWQAR IGRVAGNKDL YLGTFGTQEE AAEAYDVAAI KFRGLNAVTN  420
FDMTRYDVKS ILESTTLPIG AAAKRNLKDN NIDLTVTTLD HNINAPHIRS LSSSEENNMS  480
SQLSYGATTL YHGWPSLAFQ QPQQLYSQVP NNYTTYGHNS QKFWCKQEQD PDDHASHQNF  540
QDMHYQLQLG SNNNNNNNTH NFFQSDSGLN SIMSIGGSAS MDNNSPSSSS IIYGGGDGNN  600
GYGNGRGYMI PMATTTFNIA DDGNQNHISN GYGNDDNNEV KVVGYENGYG SSTNDPYNNA  660
RNLYYQQTSA EACNNWVPTA IPTLASRSNN VALCHGTQPF TLLHE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-124	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW13776