PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13760

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 316aa MW: 36410.3 Da PI: 6.249

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13760	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.5e-18	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed+ l+++++ +G g+W++ ar g++Rt+k+c++rw++yl OIW13760 13 RGPWTVDEDLALINYIANHGEGRWNSLARSAGLKRTGKSCRLRWLNYL 60 89********************************************97 PP
2	Myb_DNA-binding	51.2	2.8e-16	66	109	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l++++++++G++ W++Ia++++ gRt++++k++w++ OIW13760 66 RGNITLEEQLLILELHARWGNR-WSKIAQYLP-GRTDNEIKNYWRT 109 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MIQSEEEDMD LRRGPWTVDE DLALINYIAN HGEGRWNSLA RSAGLKRTGK SCRLRWLNYL 60 RPDVRRGNIT LEEQLLILEL HARWGNRWSK IAQYLPGRTD NEIKNYWRTR VQKHAKQLKC 120 DVNSKQFKDA MRYLWMPRLV ERIQAAAATT TTTTTDSSTP SAITRNVTNN NNNITYNNLN 180 NNNFEVHNEG NMMLSPSIMN NNFGCSQVKQ SYTTENSSAG TSSDSFGTYV SPVSDINHDY 240 YNVLLGSSNN NPNLGYQQQQ DHQVNFLDCI TSPSGLCSQE MDFQAMEPNN QWIQNGDTFN 300 NFWSFENMLQ QFNDNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	3e-85	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW13760