PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13389

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 523aa MW: 58046.9 Da PI: 6.8547

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13389	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.9e-17	48	95	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt Ed +l+d+v+++G g+W+++ r g+ R++k+c++rw ++l OIW13389 48 KGPWTTTEDAILIDYVTKHGEGNWNAVQRNTGLARCGKSCRLRWANHL 95 79******************************************9986 PP
2	Myb_DNA-binding	51.9	1.7e-16	101	144	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE++l+v+++ q+G++ W++ a+ ++ gRt++++k++w++ OIW13389 101 KGAFSPEEEKLIVELHSQFGNK-WARMAALLP-GRTDNEIKNYWNT 144 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MEHMNMTTIN DASNGERGLV SMIGGSGGEG GGGGGIGGGG VEEVALKKGP WTTTEDAILI 60 DYVTKHGEGN WNAVQRNTGL ARCGKSCRLR WANHLRPNLK KGAFSPEEEK LIVELHSQFG 120 NKWARMAALL PGRTDNEIKN YWNTRVKRRQ RQGLPLYSDD HDHPTTPTTP TTTTPSPFLN 180 QTGSNTNTVT KFDFLHQNYH HHSPLSPTAQ QSHHHHSPLS SPLNHRPPPS YSPHHFMDPA 240 PSYSNQQLSS TGPSSLSFTF QRPTPMLGNP LRFKRYRSSP NFNLHHLPSI TPYSTSAPPD 300 QMADLGAFRF PQQHNSSFSP QYFQTELLDS NRMVSTHNSV FSTKLELPSN QYSQPQVQQE 360 VKHDIDFNDP SLQTSSGLLG DLLFEAQAIA SGQNSKKRNY LSLNEGNDVF DGYQNFDDWP 420 LCSNYWSSTS GVKRKEESPD LSKSVNEDMS KLLTGMPSTM QGTDWNNNSA AEVSNNVQSS 480 GVTTDDNFGL DNKPIASLFP LTNTINHNEN QGYYSWDNLP GLC

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MEHMNMTTIN DASNGERGLV SMIGGSGGEG GGGGGIGGGG VEEVALKKGP WTTTEDAILI  60
DYVTKHGEGN WNAVQRNTGL ARCGKSCRLR WANHLRPNLK KGAFSPEEEK LIVELHSQFG  120
NKWARMAALL PGRTDNEIKN YWNTRVKRRQ RQGLPLYSDD HDHPTTPTTP TTTTPSPFLN  180
QTGSNTNTVT KFDFLHQNYH HHSPLSPTAQ QSHHHHSPLS SPLNHRPPPS YSPHHFMDPA  240
PSYSNQQLSS TGPSSLSFTF QRPTPMLGNP LRFKRYRSSP NFNLHHLPSI TPYSTSAPPD  300
QMADLGAFRF PQQHNSSFSP QYFQTELLDS NRMVSTHNSV FSTKLELPSN QYSQPQVQQE  360
VKHDIDFNDP SLQTSSGLLG DLLFEAQAIA SGQNSKKRNY LSLNEGNDVF DGYQNFDDWP  420
LCSNYWSSTS GVKRKEESPD LSKSVNEDMS KLLTGMPSTM QGTDWNNNSA AEVSNNVQSS  480
GVTTDDNFGL DNKPIASLFP LTNTINHNEN QGYYSWDNLP GLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	2e-66	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW13389