PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW13348
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family ARF
Protein Properties Length: 686aa    MW: 76401.3 Da    PI: 7.5594
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW13348genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.75.2e-24148249199
               EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
               f+k+lt sd++ +g l++pk +a+e+       +++++ ++l+ +d++g +W ++++yr+ ++r++lt+GW+ Fv++++L +gD ++F   + +++el+++
  OIW13348 148 FIKILTASDTSPHGGLSIPKLHANEClppldmTLQTPT-QELVAKDLHGFEWHFTHKYRGEPKRHLLTSGWSTFVNSKKLLAGDACIFL--SGENGELHIG 245
               89****************************98555544.59************************************************..449999**** PP

               EE-S CS
        B3  96 vfrk 99 
               ++r+
  OIW13348 246 IRRA 249
               **97 PP
2Auxin_resp88.31.4e-29276357183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha++t+s+F+v+Y+P++ + eF+v+v++++k+  v +s GmR++m++e eds + r+ G ++++ d+d++rWp+S Wr+L+
    OIW13348 276 ASHAVATGSMFTVYYHPWMNPFEFIVPVQHYMKSSVVDYSNGMRVQMQIEVEDSIR-RYVGSIISIGDIDSIRWPGSTWRCLE 357
                 789**************************************************875.56**********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 686 aa     Download sequence    
MQEKMDCVIG EGNGDSNYGG ACGGSSSANH HNQGVKNELK AELWRLCAGP CVYVPRVGEK  60
IFYFPQGHLE QVVAFTQHQQ DGHMDIPAYD LPSKILCRVM CVQLKAEANS DEVFAQITLV  120
PELKQNEIIS EDEEETYQIP QRTSSCSFIK ILTASDTSPH GGLSIPKLHA NECLPPLDMT  180
LQTPTQELVA KDLHGFEWHF THKYRGEPKR HLLTSGWSTF VNSKKLLAGD ACIFLSGENG  240
ELHIGIRRAK RRHNKESASI SLLSSHSMQL GILTTASHAV ATGSMFTVYY HPWMNPFEFI  300
VPVQHYMKSS VVDYSNGMRV QMQIEVEDSI RRYVGSIISI GDIDSIRWPG STWRCLEVQW  360
DAIPNKYMIP ERVCPWWIEP LKSAMKKPIP ILPLPKKARV PNLLCPGLSS FSKDDIVRNS  420
AKPASQRGER VLQGKDYINI GSPQPSQKPP PSKDAWLGLE NKLPFVMQDP PRQPLGISAS  480
FPHEDISTSS SNMNSTGSVS KGWPSESKEE NYVSFGRPGL LKLFGVNLTN TQMELPSPQF  540
AVFSQISSLI SIPPMSQTSI YATIPTTKPY DSVAVLTSEK KRKKCHLVDR RSCTKVLKQG  600
TALGRAIDLK HFAGYDELIS KLDSMFDFGG SLVNGSSGWH LTNIDDDGFM TLLGDYPWQD  660
FQSSMVQKII ICPKDGINKS QLEKIS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1580584KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.31e-114ARF family protein