PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW13262 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | WRKY | ||||||||
Protein Properties | Length: 721aa MW: 78479.2 Da PI: 6.2123 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.7 | 2.1e-32 | 312 | 369 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C v+kkvers+ +++++ei+Y+g Hnh+k OIW13262 312 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCLVRKKVERSH-EGHITEIIYKGAHNHPK 369 8****************************************.***************85 PP | |||||||
2 | WRKY | 101.6 | 4.6e-32 | 524 | 582 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct agC+v+k+ver+++d k v++tYeg+H+h+ OIW13262 524 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHDHD 582 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 721 aa Download sequence |
MAGIDDNVAL AGDLGHSIPS PRTFFSRMLG EDTVTRSISD PPGSGRIGFR THDQAESGKG 60 EIKDSSQDGD SGDQLTETSF LNDQKSNLRG GLVERMAARA GFNAPRLNTE CIRSTDLTLN 120 AHIQSPYLTI PPGLSPTTLL DSPVFLANAL AQPSPTTGKF PFISNGNILY SELSSDDPEK 180 SKDNLDDLYA SSFAFKPAID SGSSFYYGTA RNLNLTTVPQ QSVPGIETSV QSEDSFQSLS 240 VDAVNDQSKN DSGLHYQPDF VESPPQKDNG VKSFSGDKRA RSTPPEEQAN EEGDRRVNGD 300 STVAGVGGKP AEDGYNWRKY GQKQVKGSEY PRSYYKCTHP NCLVRKKVER SHEGHITEII 360 YKGAHNHPKT LNRRSGGGSV NPHTDVQLDN PEHFEPQNGG DMGWANVQKG IIVGSANWKH 420 DNPEVTSSAS VGPEYCNQST DLQTRNGTHI DLGDAVDGSS TFSNEDEDDR GTHGSISLGH 480 DGEEDESESK RRKLESYAAE LSGATRAIRE PRVVVQTTSE VDILDDGYRW RKYGQKVVKG 540 NPNPRSYYKC TNAGCTVRKH VERASHDLKS VITTYEGKHD HDIPAARSSS HINVAASSTV 600 PGQGHVHRPE PSQVHNGIGR LDRPSLSSYL PRSLQLGPSH SFSFGMNQPM LSNLAMPGFG 660 SGHGKLPSMH VHPLLAQQCP NSANEMGFML PKEESNVEPI PERGSSIYQE IMNRMALGPH 720 M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56270.1 | 1e-178 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW13262 |