PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW13093
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MYB
Protein Properties Length: 327aa    MW: 37843.9 Da    PI: 9.307
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW13093genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.39.9e-15131177148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +  WT++Ed  lv+ v+++G + W+ Ia+ +  gR +kqc++rw+++l
         OIW13093 131 KSQWTPDEDRVLVESVRRFGLKKWSHIAKLLD-GRVGKQCRERWFNHL 177
                      568*****************************.*************97 PP
2Myb_DNA-binding50.45e-16183225145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      +++W++eEd++l++a+k  G++ W+ Ia+++  gRt++ +k++w+
         OIW13093 183 KDSWSEEEDLILIEAHKNVGNK-WAEIAKRLI-GRTENTVKNHWN 225
                      679*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MVPLQQTSTL VPPPTKNIFL TPSSDNSYTN WSQINLLNSY YPIEFSPNNN AMEVSHEYLY  60
NCKGILDFPQ QIPTQYDAIL QPHVGLSLAP PPHIYASMVV NPRLEDDISH ITRAGNGHED  120
TNHKIVTNTI KSQWTPDEDR VLVESVRRFG LKKWSHIAKL LDGRVGKQCR ERWFNHLRPN  180
IRKDSWSEEE DLILIEAHKN VGNKWAEIAK RLIGRTENTV KNHWNATKRR LNTKKRINKR  240
IIPNGELLFN YIKQVTTKAL AKKEVKKSMS EMNLRSENHN DLNFHPVWYK NSENYYENDG  300
VDWLLHSYAP MMVDAGEMAS GSGMKDI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1228240KRRLNTKKRINKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.12e-55MYB family protein