PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW13020
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MYB
Protein Properties Length: 432aa    MW: 48788.1 Da    PI: 6.7527
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW13020genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.3e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd +lv+ ++++G g+W+++++  g+ R++k+c++rw++yl
         OIW13020 14 KGLWSPEEDVKLVNHITKHGHGCWSSVPKQAGLQRCGKSCRLRWLNYL 61
                     678*******************************************97 PP
2Myb_DNA-binding45.91.3e-1467110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg +++eE+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++
         OIW13020  67 RGTFSQEEENLILELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110
                      899*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MGRYSCCYKE KLRKGLWSPE EDVKLVNHIT KHGHGCWSSV PKQAGLQRCG KSCRLRWLNY  60
LRPDLKRGTF SQEEENLILE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKRLRQSG  120
IDPVTHKPLS EVENGEDNSS SLDKAPEVSN ELNLLKSESS KSDAASISPK AYATEMESSS  180
HSSKFYFKSD TNIITNNSSK DLFQDRFMTN CHSSDLMRNF PHQMSYASTD YIPNDSNSSH  240
WFSQTSRPFD IYSEYPFNAN SILTPTTSMF LPTSFNYNPS LVVSSDNIST PYGSHYWEAS  300
ASNNSNSSNG SNSSTELSSS PLNIHNSTFS SWGMGDCSTP TKEAQVHMLE NQTEEAKWNE  360
YLHNPMSMLA SMQNQYQAPE TLCNEIKPTM NFMHETLGAI LPHSHTKQQE LSQSFSIFSK  420
DIQKLTSAFG HM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112118LKKRLRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01680.37e-88MYB family protein