PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12964

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 515aa MW: 57967.1 Da PI: 5.0856

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12964	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.1e-17	33	80	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l ++v+++G g+W+++ ++ g+ R++k+c++rw ++l OIW12964 33 KGPWTAAEDAILEEYVRKHGEGNWNAVQKHSGLARCGKSCRLRWANHL 80 79******************************************9986 PP
2	Myb_DNA-binding	49.8	8e-16	86	129	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+++++++++++G++ W++ a++++ gRt++++k++w++ OIW12964 86 KGAFSAEEEDRIIELHARMGNK-WARMAAELP-GRTDNEIKNYWNT 129 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MSSMPSGGDS RKMSKGRRSS LSVEEASEGL LMKGPWTAAE DAILEEYVRK HGEGNWNAVQ 60 KHSGLARCGK SCRLRWANHL RPDLRKGAFS AEEEDRIIEL HARMGNKWAR MAAELPGRTD 120 NEIKNYWNTR IKRRLRSGLP IYPADICLRV LNNNQESLDV GTLKNESGQH DDASQTDNFD 180 IPELEFQNYE IHRGLPYAPA IFDIPENLFQ QSSDSSHSYN AMSSTHPRKR LRESDELYNN 240 SFDGYISSTV PLFDQYGNYT SKIVSDHPRF SSPYDLLLDT GQFHGYNFPG SHAALNGNTS 300 SSMPITEAMK LELPSLQYLE DQQGSWGMPA SPLPSLESVD TFIQSPPTDP SWTDPLSPRS 360 SGLLEAIIWE SKKNLRDSNN NSLTQTPENC VSNEAFKNLT LNPRMTECDE QWELNSPLGQ 420 SAASVLTDYT PINLCSMDGP QSIETTQNHD TNHRSVPQFP PAYSSRNNKR LRKIDLTRPD 480 ALFEFGLFEN STEYSKDQNV LRNALDALLG DDFQG

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MSSMPSGGDS RKMSKGRRSS LSVEEASEGL LMKGPWTAAE DAILEEYVRK HGEGNWNAVQ  60
KHSGLARCGK SCRLRWANHL RPDLRKGAFS AEEEDRIIEL HARMGNKWAR MAAELPGRTD  120
NEIKNYWNTR IKRRLRSGLP IYPADICLRV LNNNQESLDV GTLKNESGQH DDASQTDNFD  180
IPELEFQNYE IHRGLPYAPA IFDIPENLFQ QSSDSSHSYN AMSSTHPRKR LRESDELYNN  240
SFDGYISSTV PLFDQYGNYT SKIVSDHPRF SSPYDLLLDT GQFHGYNFPG SHAALNGNTS  300
SSMPITEAMK LELPSLQYLE DQQGSWGMPA SPLPSLESVD TFIQSPPTDP SWTDPLSPRS  360
SGLLEAIIWE SKKNLRDSNN NSLTQTPENC VSNEAFKNLT LNPRMTECDE QWELNSPLGQ  420
SAASVLTDYT PINLCSMDGP QSIETTQNHD TNHRSVPQFP PAYSSRNNKR LRKIDLTRPD  480
ALFEFGLFEN STEYSKDQNV LRNALDALLG DDFQG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	136	RIKRRLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	1e-87	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW12964