PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW12957 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | MYB | ||||||||
Protein Properties | Length: 228aa MW: 26448.4 Da PI: 8.7965 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.4 | 3.9e-09 | 17 | 62 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 rWT d+l+ +a + + +W++Ia++++ g+++ ++k+++ OIW12957 17 SRWTHHQDKLFERALVVVPENtpdRWEKIAEKVQ-GKSAAEVKEHYD 62 59*****************99*************.**********95 PP | |||||||
2 | Myb_DNA-binding | 49.7 | 8.6e-16 | 113 | 157 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++d+ ++G+g+W++I+r + +Rt+ q+ s+ qky OIW12957 113 PWTEEEHRLFLDGLSKFGKGDWRSISRNVVVTRTPTQVASHAQKY 157 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MFHDSTTMPT RWPTHPSRWT HHQDKLFERA LVVVPENTPD RWEKIAEKVQ GKSAAEVKEH 60 YDDLVHDVFE IDSGRVAVPE YTDESSSAWN SSNQISFMSK RKYGDSERKK GTPWTEEEHR 120 LFLDGLSKFG KGDWRSISRN VVVTRTPTQV ASHAQKYFLR QKSIKKERKR SSIHDITTVD 180 SNSVSVPMDQ NRVPPPGRPM QHSQEMQFNP INNLHDQMGG FGYSNYDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 8e-68 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW12957 |