PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW12936 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 204aa MW: 22545.7 Da PI: 6.9735 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 88.6 | 7.9e-28 | 4 | 107 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 +C++C++lr++C ++Cv++p++ p++q++++ +++k++G++ +++l++a+pe+ r+d+++sl+ eA+ r+ +P yG++g++++++++ ++++++++l OIW12936 4 SCNGCRILRKGCGDNCVIRPCLewinsPESQANATMFLAKFYGRTALVNLISAAPEHLRTDVFKSLLHEACGRLVNPTYGSMGLLWSGEWNRCEAAVDAVL 104 6***********************************************************************************************99988 PP DUF260 97 lke 99 +++ OIW12936 105 TGS 107 776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MKVSCNGCRI LRKGCGDNCV IRPCLEWINS PESQANATMF LAKFYGRTAL VNLISAAPEH 60 LRTDVFKSLL HEACGRLVNP TYGSMGLLWS GEWNRCEAAV DAVLTGSRIL DVAGFDWHAT 120 RTHVGGAENI FPTCDIRHVP RARDMDNVGE RGRSKRARRN FKATPQLGVV DSPENESMET 180 VEQPLNQGVA ETELNLELTL AFPC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67100.1 | 9e-58 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW12936 |