PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW12598
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family GRAS
Protein Properties Length: 467aa    MW: 53414 Da    PI: 6.7976
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW12598genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS294.33.1e-90884654374
      GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIle 104
               lLl++A+ v+++++  a + L++l +++s +gd++qR++ayf  +L arl+   s  y+ l  ++t+     ee+ a++ ++ vsP+++f+h+taNqaIle
  OIW12598  88 LLLTAATLVDNNNFGSALENLTELYKIVSMKGDSVQRVVAYFSDGLVARLLTRNSPFYDMLMEEPTT----GEEFLAFTDLYRVSPYYQFAHFTANQAILE 184
               79**************************************************9*****999988887....6777888899******************** PP

      GRAS 105 avege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrledleleeLrvk 197
                +e+e     +++H+iDfd+s+G+QWp+L+q+L++++  ++  slRiTg+g+    + +el+et++rL +f + + ++ fef+ l    l   ++ +Lr k
  OIW12598 185 VFEKEeeknnRAIHVIDFDVSYGFQWPSLIQSLSEKAtsGNRISLRITGFGK----NLKELQETESRLISFSKGFgNLVFEFQGL----LRGSRVINLRKK 277
               ***9988887889**********************99755566*********....99***************99459******8....77778899**** PP

      GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
               ++E++aVnlv  l +l    ++    ++++L +v sl+P +vv+veqe ++  + +Fl rf+++l+y++a+fdsl+  lp es er  +E++llg+ei+++
  OIW12598 278 KNETVAVNLVSYLNTLS-CFLK----ISDTLGFVHSLNPSIVVLVEQEGSRsPNRTFLSRFTDTLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKSI 373
               ***********999997.3333....467*******************9998899********************************************** PP

      GRAS 298 vacegae..rrerhetlekWrerleeaGFkpvplsekaakqaklllrkv........ksdg...yrveee..sgslv.lgWkdrpLvsvSaWr 374
               +     +     + e++e+W+ r+e+ GF+  ++s+k   qaklll++         +++g   +rv e+   ++ + lgW++r L++vSaW+
  OIW12598 374 LNYYDIDgvDCPKYERMETWKTRMENHGFGGTKISSKSIIQAKLLLKMRthycplqfEEEGgggFRVSERdeAKA-IsLGWQNRFLLTVSAWK 465
               *99887733467899*******************************98522222211222234488887632344.35**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    
MEDSEDELLN LTLSVAADRE RKKKGKIIIR DHNNIASSMS TTHSMNPYED CYEGKIFRLL  60
QVRDQMLRQD HRLWNKGVIV EEGNGLPLLL TAATLVDNNN FGSALENLTE LYKIVSMKGD  120
SVQRVVAYFS DGLVARLLTR NSPFYDMLME EPTTGEEFLA FTDLYRVSPY YQFAHFTANQ  180
AILEVFEKEE EKNNRAIHVI DFDVSYGFQW PSLIQSLSEK ATSGNRISLR ITGFGKNLKE  240
LQETESRLIS FSKGFGNLVF EFQGLLRGSR VINLRKKKNE TVAVNLVSYL NTLSCFLKIS  300
DTLGFVHSLN PSIVVLVEQE GSRSPNRTFL SRFTDTLHYF AAMFDSLDDC LPLESTERLR  360
IEKKLLGKEI KSILNYYDID GVDCPKYERM ETWKTRMENH GFGGTKISSK SIIQAKLLLK  420
MRTHYCPLQF EEEGGGGFRV SERDEAKAIS LGWQNRFLLT VSAWKPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.13e-55GRAS family protein