PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12459

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 412aa MW: 45114 Da PI: 6.3218

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12459	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.4e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl OIW12459 14 KGPWTPEEDQKLLAYIEEHGHGCWRALPSKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.8	9.4e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l OIW12459 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE EHGHGCWRAL PSKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLTKLG 120 IDPITHKHKN DTLLSSDGQS KTVANLSHMA QWESARLEAE ARLVRESKLR SHSLQNQLGS 180 STFASSSSAS TSVLIINSHK QDPSSSASPR LDVFKAWNNG GWLKSNEVSN GVGDLESPTS 240 TLSFCETAPP IMATTSGGGG GILGENTMPM IEFVACSGSS VKEEGDQEWK GYESSTNLTE 300 YKDGIMENSM TTFTCGLHEL TMSMEGATTW SGSHESLRTN DHAIAEQGFT NLLLNANSGD 360 DRSLSEGGGD SNNRDDSSSG NGSGDDFCED NKNYWNSILN LVTSSPSDSP MF

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE EHGHGCWRAL PSKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLTKLG  120
IDPITHKHKN DTLLSSDGQS KTVANLSHMA QWESARLEAE ARLVRESKLR SHSLQNQLGS  180
STFASSSSAS TSVLIINSHK QDPSSSASPR LDVFKAWNNG GWLKSNEVSN GVGDLESPTS  240
TLSFCETAPP IMATTSGGGG GILGENTMPM IEFVACSGSS VKEEGDQEWK GYESSTNLTE  300
YKDGIMENSM TTFTCGLHEL TMSMEGATTW SGSHESLRTN DHAIAEQGFT NLLLNANSGD  360
DRSLSEGGGD SNNRDDSSSG NGSGDDFCED NKNYWNSILN LVTSSPSDSP MF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-119	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW12459