PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW12442 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 218aa MW: 25551.7 Da PI: 8.488 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.3 | 2.6e-18 | 36 | 88 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe +++ e++ +LAk lgL++rqV +WFqNrRa++k OIW12442 36 KKRLKLEQVKALEKSFEIGNKLEPERKMQLAKALGLQQRQVAIWFQNRRARWK 88 4557889*********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 120.8 | 7.1e-39 | 34 | 126 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekk+rl+ eqvk+LE+sFe +kLeperK++la++Lglq+rqva+WFqnrRAR+ktkqlEk+ye+Lk++++ lk +n++L++++++L+ el++ OIW12442 34 EKKKRLKLEQVKALEKSFEIGNKLEPERKMQLAKALGLQQRQVAIWFQNRRARWKTKQLEKEYEVLKKHFQDLKLDNHNLKAHNQKLHGELQA 126 69**************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MMKRSMSFSG IENNHYDAVH GDDELSEDGS HIGEKKKRLK LEQVKALEKS FEIGNKLEPE 60 RKMQLAKALG LQQRQVAIWF QNRRARWKTK QLEKEYEVLK KHFQDLKLDN HNLKAHNQKL 120 HGELQALKNR ECFESGTISL KKETDQGSWS NASDISSNIN LDLSPKPIMN SPIYSHNGKT 180 LLHNSSRLEL QEESFTNMFH NIEDQQNFWP WPEQNHFN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 83 | 91 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 1e-64 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW12442 |