PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIW12383 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Family | LBD | ||||||||
Protein Properties | Length: 157aa MW: 17551.8 Da PI: 7.7488 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 143 | 8.8e-45 | 11 | 109 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC +dCv+apyfp e+p+kf nvhk+FGasnv+kll+++ +++reda++sl+yeAear++dPvyG+vg i+ lq+q+++l++el+++++ OIW12383 11 PCAACKFLRRKCMPDCVFAPYFPPEEPQKFTNVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVMKLQKELDATNA 109 7*********************************************************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MASSSSYSNC PCAACKFLRR KCMPDCVFAP YFPPEEPQKF TNVHKIFGAS NVSKLLNEVL 60 PHQREDAVNS LAYEAEARIK DPVYGCVGAI SVLQRQVMKL QKELDATNAD LIRYTCNEMP 120 TTTTIITTSQ RGSERGTSSI AQSSSFYYHS TWNNDHP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63090.2 | 2e-70 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIW12383 |