PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12221

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 268aa MW: 29441.3 Da PI: 7.7848

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12221	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	99.7	2.9e-31	4	108	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 +C++C+vlr++C++dC ++p++ p++q++++ +++k++G++ +++l++a p++ r+++++sl+yeA+ r+ +P+yG+vg+++++++ql+q+++e++l OIW12221 4 SCNGCRVLRKGCSEDCSIRPCLqwikkPESQANATVFLAKFYGRAGLINLINAGPQNLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVL 104 6*************************************************************************************************998 PP DUF260 97 lkee 100 +e+ OIW12221 105 NGEP 108 8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MRMSCNGCRV LRKGCSEDCS IRPCLQWIKK PESQANATVF LAKFYGRAGL INLINAGPQN 60 LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GSWQLCQAAV EAVLNGEPIT PITSEAASNG 120 RGPPLKPYDI RHVSKEVQAV KSRTRFKRTG GGDGVKPDVD NVSRFGPVEP ESEEVVNRSA 180 SHESALSHQS EVAAAAEGES KYSDSAVSAE TSVLFHDEPE SDRKLGDRAE ENAEEVRLEL 240 TLGFEPVSRV HHVVPVKKRK IELFNKLW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02550.1	2e-98	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW12221