PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW11843

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 269aa MW: 30996.3 Da PI: 6.2914

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW11843	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	129	2e-40	17	115	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCaaCk++rrkCa+dC+lapyfp++++++f n+hklFG+sn++k++k l+++e+++am++++y++++ra+dPv G+++ i+ l++q+e +++el+l+ + OIW11843 17 ACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKVLEPHEKDQAMRTIIYQSDMRANDPVGGCYRYIQVLHNQIEYHRTELELVLQ 115 7*********************************************************************************************98765 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MNNNNNNFRN GNNTTQACAA CKYQRRKCAP DCILAPYFPH DRQRQFLNAH KLFGVSNITK 60 IIKVLEPHEK DQAMRTIIYQ SDMRANDPVG GCYRYIQVLH NQIEYHRTEL ELVLQNLAIL 120 RAQAHHQQQH PQHVYDPTLT NVNVGINGED VMSAGELGDP LSFYNSAAAQ NHYHYIQQVP 180 QQEQYIMLQE SNENNCSNNN NNTMLQDHVN SWAMQNSMSL SSLSLQGQSS NASLGDEYDH 240 RSMLEMPSED RNDIRFEVED LGHHRFVDH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	8e-56	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW11843