PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW11823
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family GRAS
Protein Properties Length: 568aa    MW: 63836.5 Da    PI: 7.087
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW11823genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS248.62.4e-761755552374
      GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl...fsevsPilkfshltaN 99 
               ++lL  cA a+s g+l+++q+lL  l+elasp+gd+++Rlaa+ ++AL ++l++s+ + +++ ++s   +  s++  +++k    f+evsP++ f + +aN
  OIW11823 175 EQLLNPCAVAISGGNLNRVQHLLYVLNELASPTGDANHRLAAHGLKALTHHLSSSSLSSSSSATSSGVITFASADPRFFQKSllkFYEVSPWFSFPNNIAN 275
               689***************************************************4333333333333322334444444444578**************** PP

      GRAS 100 qaIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.......skeeleetgerLakfAeelgvpfefnvlvakrled 188
                 Il+ ++++    +++Hi+D+++s+G+QWp +l+aL+ +p ++pp +R+T+v +++++             +  +rL  fA++++++++++ l  + l++
  OIW11823 276 ASILQVLAEApnstRTLHILDIGVSHGMQWPIFLEALSRKPgGPPPLVRLTVVTAENEQnketpfsVGPPGDNFSSRLLGFAKSMNINLQIKKLDNHPLQS 376
               ****9999888777999************************55666*******9988877677766666778999******************9999**** PP

      GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..ns.esFlerflealeyysalfdsleaklpreseerikvE 286
               l+ + ++++p+E+ +V+ +++lh+l    ++ ++er+e+Lk++++++P+ v+++e+++++  ns ++F+++f++ +ey + ++ds+++ +    + r   E
  OIW11823 377 LNAQIIDTSPDETFIVCAQFRLHHLN---HNASNERNEFLKVLRNMEPQGVILSENNMECccNScGNFADGFSRRVEYLWRFLDSTSSAF----KGRECDE 470
               *************************8...66666679********************8887655269*******************8886....7777888 PP

      GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
               r++++ e+ ++++++ ++    +e +ekW  +++eaGF    ++e+a +  ++llrk++ +++++vee++ s+ l Wk++p+ ++S W+
  OIW11823 471 RRVMEGEAAKILTNQREM----NEGKEKWFGKMKEAGFIWQVFGEDAIDGGQALLRKYDsNWEMKVEENNTSVGLWWKGQPVSFCSLWK 555
               888888899999998887....9************************************9999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    
MTMEPHQTSD HILDWLESSV SYFPSFLDEP YNSGEVQEYQ LWDQEDQHTV SQYHIDANID  60
SLNAINPNSN TNTIAAATST TTSTTPPEPY DSSNIPLFDM PKKKNATDVL SLKPTQNHKY  120
KKIKSRPMNK RENRDTVIKE TTTVIRKSSG NKKGSAKANA NNLNNRNNKE GRWAEQLLNP  180
CAVAISGGNL NRVQHLLYVL NELASPTGDA NHRLAAHGLK ALTHHLSSSS LSSSSSATSS  240
GVITFASADP RFFQKSLLKF YEVSPWFSFP NNIANASILQ VLAEAPNSTR TLHILDIGVS  300
HGMQWPIFLE ALSRKPGGPP PLVRLTVVTA ENEQNKETPF SVGPPGDNFS SRLLGFAKSM  360
NINLQIKKLD NHPLQSLNAQ IIDTSPDETF IVCAQFRLHH LNHNASNERN EFLKVLRNME  420
PQGVILSENN MECCCNSCGN FADGFSRRVE YLWRFLDSTS SAFKGRECDE RRVMEGEAAK  480
ILTNQREMNE GKEKWFGKMK EAGFIWQVFG EDAIDGGQAL LRKYDSNWEM KVEENNTSVG  540
LWWKGQPVSF CSLWKLDGNY QSRFRDQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-150GRAS family protein