PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW11774

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 360aa MW: 39207.4 Da PI: 6.9972

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW11774	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.7	8.4e-18	190	244	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Le+ F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k OIW11774 190 RKKLRLSKEQSAFLEDSFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 244 788899***********************************************98 PP
2	HD-ZIP_I/II	127.7	5.1e-41	190	280	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LE+sF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk OIW11774 190 RKKLRLSKEQSAFLEDSFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEMDCEYLKRCCETLTEENRRLHKELQELR-ALK 280 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MELGLSLGDS SRPFVGFIEK PSEVSNQHGL GFNTTLSIGP IITTQRDQPQ QHEQEQLETK 60 PSNNNNSGHS VSPKNNNVMH QLDLLPRLSL PWLPPSQNAE LGGCSRSLDV NTLPAAAAED 120 EVEEGAALSS SPNSAASPLQ MDLSIYNARG GSLSGSGGNY YYNGGGGGDS GGKRDSDDGD 180 EDDNVGGSSR KKLRLSKEQS AFLEDSFKEH STLNPKQKLA LAKQLNLRPR QVEVWFQNRR 240 ARTKLKQTEM DCEYLKRCCE TLTEENRRLH KELQELRALK TSKPFYMQLP ATTLTMCPSC 300 ERVATNSTST SSATPSSATN NANSGAMVTA KTSNDSKVVG FPLGKPMFHS FSHTTQPYTH

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MELGLSLGDS SRPFVGFIEK PSEVSNQHGL GFNTTLSIGP IITTQRDQPQ QHEQEQLETK  60
PSNNNNSGHS VSPKNNNVMH QLDLLPRLSL PWLPPSQNAE LGGCSRSLDV NTLPAAAAED  120
EVEEGAALSS SPNSAASPLQ MDLSIYNARG GSLSGSGGNY YYNGGGGGDS GGKRDSDDGD  180
EDDNVGGSSR KKLRLSKEQS AFLEDSFKEH STLNPKQKLA LAKQLNLRPR QVEVWFQNRR  240
ARTKLKQTEM DCEYLKRCCE TLTEENRRLH KELQELRALK TSKPFYMQLP ATTLTMCPSC  300
ERVATNSTST SSATPSSATN NANSGAMVTA KTSNDSKVVG FPLGKPMFHS FSHTTQPYTH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	189	195	SRKKLRL
2	239	247	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	2e-59	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIW11774